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UGID:297942     UniGene Mm.171323     Mus musculus (mouse)   Tgs1
Trimethylguanosine synthase homolog (S. cerevisiae) (Tgs1)

Mouse protein-coding gene Tgs1. Represented by 201 ESTs from 97 cDNA libraries. Corresponds to reference sequence NM_054089.4. [UniGene 297942 - Mm.171323]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_473430.3 trimethylguanosine synthase M. musculus 100.0 852
NP_079107.6 TGS1 gene product H. sapiens 82.0 850
NP_001154386.2 S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein A. thaliana 57.6 205
NP_001085693.1 trimethylguanosine synthase 1 X. laevis 55.7 836
NP_001122517.1 Protein T08G11.4, isoform b C. elegans 53.7 382
NP_732316.2 tat-like D. melanogaster 50.9 327
XP_003197913.1 PREDICTED: trimethylguanosine synthase-like D. rerio 50.0 793
Other hits (2 of 48) [Show all]SpeciesId(%)Len(aa)
NP_001101374.1 trimethylguanosine synthase R. norvegicus 92.5 845
XP_001084320.1 PREDICTED: trimethylguanosine synthase isoform 2 M. mulatta 81.9 852

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mixed; brain; eye; mammary gland; uncharacterized tissue; spleen; bone marrow; pancreas; lymph node; kidney; skin; thymus; testis; blood; vagina; spinal cord; oviduct; ovary; liver; bone; prostate; lung; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4 A1|4 1.99 cM
UniSTS entry: Chr 4 BB224415
UniSTS entry: Chr 4 D4Ertd800e
UniSTS entry: Chr 8 Tgs1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK033089.1 Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030404M04 product:nuclear receptor coactivator 6 interacting protein, full insert sequence P
AK050044.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730006J21 product:nuclear receptor coactivator 6 interacting protein, full insert sequence P
AK044895.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130010L05 product:nuclear receptor coactivator 6 interacting protein, full insert sequence P
AK042238.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630074B15 product:nuclear receptor coactivator 6 interacting protein, full insert sequence
AK040591.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430108A10 product:unclassifiable, full insert sequence
AK040582.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430107I24 product:nuclear receptor coactivator 6 interacting protein, full insert sequence
AK030953.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830468L16 product:nuclear receptor coactivator 6 interacting protein, full insert sequence P
BC058183.1 Mus musculus trimethylguanosine synthase homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5324421), partial cds PA
BC075728.1 Mus musculus trimethylguanosine synthase homolog (S. cerevisiae), mRNA (cDNA clone MGC:78321 IMAGE:6513964), complete cds PA
AK170949.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630212G06 product:nuclear receptor coactivator 6 interacting protein, full insert sequence P
AF389908.1 Mus musculus PIMT (Pimt) mRNA, complete cds P
NM_054089.4 Mus musculus trimethylguanosine synthase homolog (S. cerevisiae) (Tgs1), mRNA PA
BC026368.1 Mus musculus trimethylguanosine synthase homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4159018), partial cds PA

EST sequences (10 of 201) [Show all sequences]

CA565076.1 Clone NIA:K0333E12_IMAGE:30057467 bone 5' read P
CA565102.1 Clone NIA:K0333H03_IMAGE:30057494 bone 5' read P
BY012525.1 Clone G730033I16 lung 5' read P
BY016694.1 Clone G830018G10 mammary gland 5' read
BY020441.1 Clone G830041I07 mammary gland 5' read
BY025611.1 Clone G930031J06 mammary gland 5' read
BY079204.1 Clone K630018B03 mixed 5' read P
BY182768.1 Clone F630103K18 uncharacterized tissue 5' read P
BY379434.1 Clone G930118E05 mammary gland 3' read PA
BY531151.1 Clone F630212G06 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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