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UGID:295743     UniGene Mm.158700     Mus musculus (mouse)   Vcan
Versican (Vcan)

Mouse protein-coding gene Vcan. Represented by 222 ESTs from 109 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 295743 - Mm.158700]

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mixed; lung; eye; oviduct; prostate; uterus; skin; mammary gland; thymus; other; testis; spinal cord; molar; bladder; uncharacterized tissue; spleen; dorsal root ganglion; ovary; pituitary gland; pancreas; inner ear; liver; heart; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13 C3|13 45.5 cM
UniSTS entry: Cspg2
UniSTS entry: Chr 13 Cspg2
UniSTS entry: Chr 13 Cspg2
UniSTS entry: Cspg2
UniSTS entry: Cspg2
UniSTS entry: Cspg2
UniSTS entry: Vcan
UniSTS entry: RH134008
UniSTS entry: Cspg2
UniSTS entry: Cspg2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AK040503.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430104A16 product:chondroitin sulfate proteoglycan 2, full insert sequence P
AK034871.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430051N09 product:chondroitin sulfate proteoglycan 2, full insert sequence P
AK087780.1 Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330020B03 product:unclassifiable, full insert sequence
AK045314.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130064N04 product:chondroitin sulfate proteoglycan 2, full insert sequence P
AK014525.1 Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631420C02 product:chondroitin sulfate proteoglycan 2, full insert sequence P
BC021652.1 Mus musculus versican, mRNA (cDNA clone IMAGE:3989864), partial cds PA
BC096495.1 Mus musculus versican, mRNA (cDNA clone IMAGE:30739544), complete cds PA
AK163927.1 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230064F06 product:chondroitin sulfate proteoglycan 2, full insert sequence P
AK135324.1 Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720478O07 product:chondroitin sulfate proteoglycan 2, full insert sequence P
AK161227.1 Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833432P13 product:chondroitin sulfate proteoglycan 2, full insert sequence P
AK165069.1 Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230033E22 product:chondroitin sulfate proteoglycan 2, full insert sequence P
NM_001081249.1 Mus musculus versican (Vcan), transcript variant 1, mRNA P
NM_001134475.1 Mus musculus versican (Vcan), transcript variant 4, mRNA P
NM_001134474.1 Mus musculus versican (Vcan), transcript variant 3, mRNA P
NM_172955.1 Mus musculus versican (Vcan), transcript variant 5, mRNA PA
D28599.1 Mus musculus mRNA, large chondroitin sulfate proteoglycan region P
D16263.1 Mus musculus mRNA for PG-M/versican, complete cds P
D32040.1 Mus musculus pgM3 mRNA for proteoglycan PG-M(V3), complete cds P
NM_019389.2 Mus musculus versican (Vcan), transcript variant 2, mRNA P

EST sequences (10 of 222) [Show all sequences]

CA568484.1 Clone NIA:K0428D06_IMAGE:30061769 bone marrow 5' read P
BY004398.1 Clone E530219B05 brain 5' read P
BY014695.1 Clone G730047J06 lung 5' read
BY375897.1 Clone G730047J06 lung 3' read P
BY568309.1 Clone F830209C16 spleen 3' read
BY568342.1 Clone F830209E16 spleen 3' read
BY713939.1 Clone 4631420C02 skin 5' read P
BY721630.1 Clone 9430022L12 embryonic tissue 5' read P
CA896421.1 Clone NIA:B0199A02_IMAGE:30103297 uncharacterized tissue 3' read
CA896422.1 Clone NIA:B0199A02_IMAGE:30103297 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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