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UGID:256269     UniGene Mm.1297     Mus musculus (mouse)   Trap1a
Tumor rejection antigen P1A (Trap1a)

Mouse protein-coding gene Trap1a. Represented by 71 ESTs from 26 cDNA libraries. EST representation biased toward extraembryonic tissue; egg cylinder. Corresponds to reference sequence NM_011635.1. [UniGene 256269 - Mm.1297]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_035765.1 tumor rejection antigen P815A M. musculus 100.0 223
Other hits (SpeciesId(%)Len(aa)
XP_001058030.1 PREDICTED: tumor rejection antigen P815A-like R. norvegicus 67.9 209

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: extraembryonic tissue [show more like this]
egg cylinder [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; extraembryonic tissue; mixed; uncharacterized tissue; testis
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: X F1|X 61.35 cM
UniSTS entry: Trap1a
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC051644.1 Mus musculus tumor rejection antigen P1A, mRNA (cDNA clone MGC:60563 IMAGE:30022193), complete cds PA
AK146737.1 Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920048G10 product:tumor rejection antigen P1A, full insert sequence P
M36387.1 Mouse tumor rejection antigen P815A mRNA, complete cds P
NM_011635.1 Mus musculus tumor rejection antigen P1A (Trap1a), mRNA P

EST sequences (10 of 71) [Show all sequences]

BY029614.1 Clone I030003D24 embryonic tissue 5' read
BY066366.1 Clone I920048G10 extraembryonic tissue 5' read P
BY060442.1 Clone I920007K05 mixed 5' read P
BY100966.1 Clone K630135I07 extraembryonic tissue 5' read P
BY380604.1 Clone I030003D24 embryonic tissue 3' read A
BY391661.1 Clone I530005K12 extraembryonic tissue 3' read A
BY419966.1 Clone I920048G10 extraembryonic tissue 3' read PA
BY726142.1 Clone B020039J23 embryonic tissue 5' read P
CK021406.1 Clone IMAGE:30712797 extraembryonic tissue 5' read P
CK021668.1 Clone IMAGE:30712481 extraembryonic tissue 5' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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