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UGID:256187     UniGene Mm.1155     Mus musculus (mouse)   Tuba4a
Tubulin, alpha 4A (Tuba4a)

Mouse protein-coding gene Tuba4a. Represented by 673 ESTs from 160 cDNA libraries. Corresponds to reference sequence NM_009447.3. [UniGene 256187 - Mm.1155]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033473.1 tubulin alpha-4A chain M. musculus 100.0 447
NP_001007005.1 Tuba4a gene product R. norvegicus 100.0 447
XP_001362638.1 PREDICTED: tubulin alpha-4A chain-like M. domestica 100.0 447
XP_001101117.1 PREDICTED: tubulin alpha-4A chain isoform 9 M. mulatta 100.0 447
XP_003908033.1 PREDICTED: tubulin alpha-4A chain isoform 1 P. anubis 100.0 447
XP_003309539.1 PREDICTED: tubulin alpha-4A chain isoform 1 P. troglodytes 100.0 447
NP_005991.1 TUBA4A gene product H. sapiens 100.0 447
XP_536077.2 PREDICTED: tubulin alpha-4A chain isoform 1 C. lupus familiaris 100.0 447
XP_001491960.2 PREDICTED: tubulin alpha-4A chain E. caballus 100.0 447
XP_001928370.3 PREDICTED: tubulin alpha-4A chain S. scrofa 100.0 447
NP_001071626.1 TUBA4A gene product B. taurus 100.0 447
NP_001156527.1 TUBA4A gene product O. aries 100.0 447
XP_002712534.1 PREDICTED: tubulin, alpha 4a O. cuniculus 100.0 447
NP_001016694.1 tuba4b gene product X. tropicalis 99.5 448
NP_001087937.1 tubulin, alpha 4b X. laevis 99.5 447
NP_919369.2 tuba1b gene product D. rerio 98.7 448
NP_476772.1 alpha-Tubulin at 84B D. melanogaster 96.9 448
NP_497663.1 Protein MEC-12 C. elegans 95.3 449
XP_001691876.1 alpha tubulin 1 C. reinhardtii 87.5 447
NP_171974.1 tubulin alpha-2/alpha-4 chain A. thaliana 87.3 449
XP_963223.1 tubulin alpha-B chain N. crassa 83.6 446
NP_013625.1 Tub1p S. cerevisiae 80.0 446
Other hits (2 of 57) [Show all]SpeciesId(%)Len(aa)
XP_002195767.1 PREDICTED: tubulin, alpha 8 isoform 1 T. guttata 99.1 447
XP_003641692.1 PREDICTED: tubulin alpha-5 chain-like G. gallus 98.9 456

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; liver; mammary gland; lung; joint; thymus; mixed; bone marrow; eye; kidney; pituitary gland; intestine; muscle; prostate; ovary; pancreas; skin; testis; pineal gland; stomach; uncharacterized tissue; extraembryonic tissue; tongue; salivary gland; spleen; heart; sympathetic ganglion; connective tissue; bone; thyroid; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1|1 C3
UniSTS entry: Chr 15 RH78682
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK078355.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530406I01 product:tubulin alpha 4, full insert sequence P
K03466.1 Mouse alpha-tubulin isotype M-alpha-4L mRNA, 5' end
AK158934.1 Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530012D09 product:tubulin, alpha 4, full insert sequence P
M13444.1 Mouse alpha-tubulin isotype M-alpha-4 mRNA, complete cds P
NM_009447.3 Mus musculus tubulin, alpha 4A (Tuba4a), mRNA P
AK002427.1 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610009N15 product:tubulin alpha 4, full insert sequence P
BC019959.1 Mus musculus tubulin, alpha 4A, mRNA (cDNA clone MGC:18926 IMAGE:3597093), complete cds PA

EST sequences (10 of 673) [Show all sequences]

CA563883.1 Clone NIA:K0319B12_IMAGE:30056087 bone 5' read P
CA573765.1 Clone NIA:K0605E03_IMAGE:30069266 bone marrow 5' read P
CA574118.1 Clone NIA:K0610E12_IMAGE:30069755 bone marrow 5' read P
BY005256.1 Clone F420004O09 spleen 5' read
BY035437.1 Clone I530019B16 liver 5' read P
BY037498.1 Clone I730001J03 thymus 5' read P
BY038534.1 Clone I730005I15 thymus 5' read P
BY044328.1 Clone I730032D08 thymus 5' read P
BY046483.1 Clone I730042D14 spleen 5' read P
BY050345.1 Clone I730060B19 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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