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UGID:280262     UniGene Mm.104919     Mus musculus (mouse)   Bcas2
Breast carcinoma amplified sequence 2 (Bcas2)

Mouse protein-coding gene Bcas2. Represented by 576 ESTs from 205 cDNA libraries. Corresponds to reference sequence NM_026602.3. [UniGene 280262 - Mm.104919]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_080878.2 pre-mRNA-splicing factor SPF27 M. musculus 100.0 224
NP_001099928.1 Bcas2 gene product R. norvegicus 100.0 224
XP_003308351.1 PREDICTED: pre-mRNA-splicing factor SPF27 isoform 1 P. troglodytes 100.0 224
NP_005863.1 BCAS2 gene product H. sapiens 100.0 224
XP_533014.1 PREDICTED: pre-mRNA-splicing factor SPF27 C. lupus familiaris 100.0 224
NP_001231353.1 BCAS2 gene product S. scrofa 100.0 224
NP_001015540.1 BCAS2 gene product B. taurus 100.0 224
XP_002715797.1 PREDICTED: breast carcinoma amplified sequence 2 O. cuniculus 100.0 224
XP_001083579.2 PREDICTED: pre-mRNA-splicing factor SPF27-like M. mulatta 100.0 141
XP_003892484.1 PREDICTED: pre-mRNA-splicing factor SPF27-like P. anubis 100.0 139
XP_004003661.1 PREDICTED: pre-mRNA-splicing factor SPF27-like O. aries 100.0 139
XP_001499961.1 PREDICTED: pre-mRNA-splicing factor SPF27-like E. caballus 99.6 224
NP_001088952.1 breast carcinoma amplified sequence 2 X. laevis 92.8 222
NP_001007775.1 bcas2 gene product D. rerio 88.4 224
NP_651596.1 CG4980 D. melanogaster 64.8 219
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_001373083.1 PREDICTED: pre-mRNA-splicing factor SPF27-like M. domestica 99.1 224
NP_001232208.1 putative breast carcinoma amplified sequence 2 T. guttata 98.6 139

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; thymus; testis; mammary gland; prostate; bone marrow; spleen; mixed; tongue; eye; kidney; blood; thyroid; liver; bone; lung; heart; connective tissue; intestine; uncharacterized tissue; sympathetic ganglion; ovary; spinal cord; dorsal root ganglion; skin; pancreas; pituitary gland; joint; muscle; extraembryonic tissue; stomach; oviduct; bladder; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3 F2.2|3
UniSTS entry: Chr 3 RH125958
UniSTS entry: Chr 3 AI132645
UniSTS entry: Chr 3 RH126787
UniSTS entry: Chr 9 D9Mit34.1 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC023382.1 Mus musculus breast carcinoma amplified sequence 2, mRNA (cDNA clone MGC:31032 IMAGE:5151893), complete cds PA
AK212575.1 Mus musculus cDNA, clone:Y2G0125G19, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005830, based on BLAT search
AK166967.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0025N10 product:breast carcinoma amplified sequence 2, full insert sequence P
AK153513.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830169G07 product:breast carcinoma amplified sequence 2, full insert sequence P
AK020098.1 Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430539P16 product:breast carcinoma amplified sequence 2, full insert sequence P
AK018786.1 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500036L01 product:breast carcinoma amplified sequence 2, full insert sequence P
AK005825.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700010G10 product:breast carcinoma amplified sequence 2, full insert sequence P
NM_026602.3 Mus musculus breast carcinoma amplified sequence 2 (Bcas2), mRNA PA
AY043239.1 Mus musculus DNA amplified in mammary carcinoma mRNA, complete cds PA
BC037062.1 Mus musculus breast carcinoma amplified sequence 2, mRNA (cDNA clone MGC:46764 IMAGE:4984289), complete cds PA

EST sequences (10 of 576) [Show all sequences]

BY003310.1 Clone E530112B11 brain 5' read P
BY004758.1 Clone E860005A19 embryonic tissue 5' read P
BY006668.1 Clone F530202B09 kidney 5' read P
BY009055.1 Clone G630045B06 mixed 5' read P
BY036774.1 Clone I530026M21 mixed 5' read P
BY037532.1 Clone I730001L02 thymus 5' read P
BY039863.1 Clone I730013B03 thymus 5' read P
BY040416.1 Clone I730015F06 thymus 5' read P
BY043396.1 Clone I730028G02 mixed 5' read P
BY043418.1 Clone I730028H01 mixed 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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