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UGID:2725964     UniGene Hs.656646     Homo sapiens (human)   GTF3C4
General transcription factor IIIC, polypeptide 4, 90kDa (GTF3C4)

Human protein-coding gene GTF3C4. Represented by 133 ESTs from 83 cDNA libraries. Corresponds to reference sequence NM_012204.2. [UniGene 2725964 - Hs.656646]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_036336.2 GTF3C4 gene product H. sapiens 100.0 821
XP_001104736.1 PREDICTED: general transcription factor 3C polypeptide 4 M. mulatta 99.8 822
XP_003911205.1 PREDICTED: general transcription factor 3C polypeptide 4 P. anubis 99.8 821
NP_766565.2 Gtf3c4 gene product M. musculus 96.2 816
XP_696935.1 PREDICTED: general transcription factor 3C polypeptide 4 D. rerio 65.0 761
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001168581.2 PREDICTED: general transcription factor 3C polypeptide 4 isoform 2 P. troglodytes 98.5 772
XP_001499261.2 PREDICTED: general transcription factor 3C polypeptide 4, partial E. caballus 98.3 764

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; kidney; liver; eye; placenta; lung; embryonic tissue; mixed; uncharacterized tissue; mammary gland; intestine; vascular; esophagus; adrenal gland; trachea; uterus; bone; muscle; ovary; spleen; heart; skin; lymph; connective tissue; pancreas; cervix; prostate; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.13
UniSTS entry: Chr 9 A006V03
UniSTS entry: Chr 9 PMC18813P2
UniSTS entry: Chr 1 GDB:335751
UniSTS entry: Chr 9 STS-H28428
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK126436.1 Homo sapiens cDNA FLJ44472 fis, clone UTERU2029742
BC060821.1 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone IMAGE:4825930), with apparent retained intron PA
NM_012204.2 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa (GTF3C4), mRNA P
AF142328.1 Homo sapiens transcription factor IIIC90 mRNA, complete cds P
BC094774.1 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone MGC:104675 IMAGE:4830453), complete cds PA
AK024655.1 Homo sapiens cDNA: FLJ21002 fis, clone CAE03545, highly similar to AF142328 Homo sapiens transcription factor IIIC90 mRNA PA
BC104755.1 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone MGC:132415 IMAGE:8143758), complete cds P
BC112245.1 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone MGC:138450 IMAGE:8327713), complete cds P
AK027509.1 Homo sapiens cDNA FLJ14603 fis, clone NT2RP1000357, highly similar to General transcription factor 3C polypeptide 4 (EC 2.3.1.48) P
BC022787.1 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone IMAGE:3845225), partial cds PA
AJ420451.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 909091 A
BC011619.2 Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone IMAGE:3960260), partial cds PA
AF086460.1 Homo sapiens full length insert cDNA clone ZD85A02 A

EST sequences (10 of 133) [Show all sequences]

R17802.1 Clone IMAGE:31759 brain 5' read P
BX108110.1 Clone IMAGp998A04152_;_IMAGE:31759 brain A
CB137611.1 Clone L5HLK1-35-G04 liver 5' read P
AI204607.1 Clone IMAGE:1734922 testis 3' read A
AI291092.1 Clone IMAGE:1881408 lung 3' read A
AI291387.1 Clone IMAGE:1895406 lung 3' read A
AI469025.1 Clone IMAGE:2044471 lymph node 3' read
R43008.1 Clone IMAGE:31759 brain 3' read A
R59180.1 Clone IMAGE:41472 brain 3' read A
R59236.1 Clone IMAGE:41472 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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