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UGID:912242     UniGene Hs.521495     Homo sapiens (human)   CNTNAP3B
Contactin associated protein-like 3B (CNTNAP3B)

Human protein-coding gene CNTNAP3B. Represented by 40 ESTs from 33 cDNA libraries. Corresponds to reference sequence NM_001201380.1. [UniGene 912242 - Hs.521495]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001188309.1 CNTNAP3B gene product H. sapiens 100.0 1287
NP_001074598.1 contactin-associated protein-like 3 precursor M. musculus 76.3 1286
XP_003199321.1 PREDICTED: contactin-associated protein-like 4-like D. rerio 57.1 1250
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001142532.1 PREDICTED: contactin associated protein-like 3B isoform 2 P. troglodytes 98.9 1287
XP_002800260.1 PREDICTED: contactin-associated protein-like 3-like, partial M. mulatta 95.6 977

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; liver; testis; eye; ear; embryonic tissue; placenta; stomach; uncharacterized tissue; lung; vascular; connective tissue; prostate; thymus; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p11.2
UniSTS entry: Chr 9 SHGC-34564
UniSTS entry: Chr 9 RH66553
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BX538190.1 Homo sapiens mRNA; cDNA DKFZp686I15204 (from clone DKFZp686I15204) PA
AK054645.1 Homo sapiens cDNA FLJ30083 fis, clone BGGI12001097, weakly similar to Homo sapiens contactin associated protein (Caspr) mRNA PA
NM_001201380.1 Homo sapiens contactin associated protein-like 3B (CNTNAP3B), mRNA P

EST sequences (10 of 40) [Show all sequences]

AI125778.1 Clone IMAGE:1737260 testis 3' read
AI148152.1 Clone IMAGE:1704084 brain 3' read PA
BX090925.1 Clone IMAGp998K055308_;_IMAGE:2150140 lung
CB137313.1 Clone L6ChoCK0-24-A10 liver 5' read P
AI439093.1 Clone IMAGE:2138958 kidney 3' read
BX389540.1 Clone CS0DI027YK18 placenta 5' read P
BX396962.2 Clone CS0DI027YK18 placenta 3' read P
CD300678.1 Clone IMAGE:30386517 testis 5' read P
AW015489.1 Clone IMAGE:2710448 uncharacterized tissue 3' read
AW023468.1 Clone IMAGE:2487188 ear 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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