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UGID:3349877     UniGene Hs.712722     Homo sapiens (human)   TMEM200B
Transmembrane protein 200B (TMEM200B)

Human protein-coding gene TMEM200B. Represented by 109 ESTs from 62 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 3349877 - Hs.712722]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001165339.1 TMEM200B gene product H. sapiens 100.0 306
NP_001188296.1 transmembrane protein 200B M. musculus 88.0 283
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_003891507.1 PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 200B P. anubis 98.7 306
XP_854805.1 PREDICTED: transmembrane protein 200B C. lupus familiaris 96.4 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; prostate; embryonic tissue; uncharacterized tissue; lung; kidney; eye; heart; stomach; intestine; uterus; lymph node; thymus; mammary gland; testis; cervix; brain; placenta; pancreas; adrenal gland; ear; liver; blood; bladder; skin; ovary; muscle; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p35
UniSTS entry: Chr 1 RH98235
UniSTS entry: Chr 1 G34848
UniSTS entry: Chr 1 D1S3570
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AL110282.1 Homo sapiens mRNA; cDNA DKFZp434C184 (from clone DKFZp434C184) PA
BC064375.1 Homo sapiens transmembrane protein 200B, mRNA (cDNA clone MGC:70973 IMAGE:5722634), complete cds PA
BC064538.1 Homo sapiens transmembrane protein 200B, mRNA (cDNA clone IMAGE:5723682), partial cds PA
NM_001003682.3 Homo sapiens transmembrane protein 200B (TMEM200B), transcript variant 2, mRNA PA
BC082989.1 Homo sapiens transmembrane protein 200B, mRNA (cDNA clone MGC:90489 IMAGE:5763085), complete cds PA
BC110336.1 Homo sapiens transmembrane protein 200B, mRNA (cDNA clone MGC:102864 IMAGE:5753003), complete cds PA
BC033289.1 Homo sapiens TTMB protein, mRNA (cDNA clone IMAGE:4472605) A
NM_001171868.1 Homo sapiens transmembrane protein 200B (TMEM200B), transcript variant 1, mRNA PA

EST sequences (109)

AA911247.1 Clone IMAGE:1521016 lung 3' read
AI016488.1 Clone IMAGE:1623699 embryonic tissue 3' read A
AI027947.1 Clone IMAGE:1643985 testis 3' read
AI038298.1 Clone IMAGE:1659548 embryonic tissue 3' read A
AI092139.1 Clone IMAGE:1691103 heart 3' read
AI147015.1 Clone IMAGE:1693238 heart 3' read A
AI149913.1 Clone IMAGE:1751808 testis 3' read A
AI185558.1 Clone IMAGE:1742846 lung 3' read
AI201750.1 Clone IMAGE:1944015 prostate 3' read A
AI264070.1 Clone IMAGE:1855735 mixed 3' read A
CB158940.1 Clone L18POOL1n1-32-E01 liver 5' read
AI242375.1 Clone IMAGE:1856569 mixed 3' read A
AI350089.1 Clone IMAGE:1909843 lung 3' read
AI367819.1 Clone IMAGE:1934972 mixed 3' read A
AI440259.1 Clone IMAGE:2140229 stomach 3' read
AI524491.1 Clone IMAGE:2181086 uterus 3' read A
AI539401.1 Clone IMAGE:2089709 mixed 3' read A
AI400417.1 Clone IMAGE:2119076 prostate 3' read A
AI580066.1 Clone IMAGE:2151146 mixed 3' read A
AI583193.1 Clone IMAGE:2213622 lung 3' read A
AI620623.1 Clone IMAGE:2254240 prostate 3' read A
AI659802.1 Clone IMAGE:2249935 prostate 3' read A
AI674407.1 Clone IMAGE:2321480 prostate 3' read A
AI686492.1 Clone IMAGE:2252941 prostate 3' read A
AI699762.1 Clone IMAGE:2288374 uterus 3' read A
AI769557.1 Clone IMAGE:2403767 kidney 3' read A
AI804757.1 Clone IMAGE:2253715 prostate 3' read A
AI829046.1 Clone IMAGE:2402279 kidney 3' read A
BX329621.2 Clone CS0DC020YH05 uncharacterized tissue 3' read
AW003027.1 Clone IMAGE:2475761 uncharacterized tissue 3' read A
CD515817.1 Clone IMAGE:30394910 brain 5' read A
AW027517.1 Clone IMAGE:2535258 thymus 3' read
AW170527.1 Clone IMAGE:2698366 cervix 3' read
BP432879.1 Clone LEUS1862_H3
AW292543.1 Clone IMAGE:2725258 uncharacterized tissue 3' read A
AW305023.1 Clone IMAGE:2826555 brain 3' read
AW591851.1 Clone IMAGE:2850570 lymph node 3' read
AW592289.1 Clone IMAGE:2944424 mixed 3' read
CN485216.1 Clone hx24g02 eye 5' read
CN430239.1 embryonic tissue 5' read
CN430240.1 embryonic tissue 5' read P
CR738972.1 Clone IMAGp998F225818_;_IMAGE:2344725 intestine 5' read
H25903.1 Clone IMAGE:162160 mammary gland 5' read
BE535300.1 Clone IMAGE:3445162 placenta 5' read
H42039.1 Clone IMAGE:182379 mammary gland 3' read A
H42080.1 Clone IMAGE:182379 mammary gland 5' read
BP394627.1 Clone hbt01283 pancreas 3' read
BP397652.1 Clone h-t-252-04 pancreas 3' read
BE855969.1 Clone IMAGE:3303773 prostate 3' read A
BF001486.1 Clone IMAGE:3313604 intestine 3' read
AV703226.1 Clone ADBAFD07 adrenal gland 5' read
BF029884.1 Clone IMAGE:3827120 kidney 5' read
DR761938.1 Clone IMAGE:7971676 embryonic tissue 5' read
DV461418.1 Clone n589 ear 5' read
DV462170.1 Clone n1139 ear 5' read
H78080.1 Clone IMAGE:240404 mixed 5' read
DA898076.1 Clone SKMUS2006262 muscle 5' read
DB132938.1 Clone THYMU3003084 thymus 5' read
H85966.1 Clone IMAGE:223140 eye 3' read
H89831.1 Clone IMAGE:241632 mixed 5' read
BF939402.1 Clone IMAGE:3410569 prostate 3' read A
BG163417.1 Clone IMAGE:4446335 kidney 5' read
DB520985.1 Clone H013069L16 testis 3' read
BG253524.1 Clone IMAGE:4472605 liver 5' read
BG230609.1 Clone IMAGE:4143323 blood 3' read
BG403656.1 Clone IMAGE:4526370 bladder 5' read
BG676259.1 Clone IMAGE:4747766 skin 5' read
ES311638.1 skin 5' read
N94179.1 Clone IMAGE:293686 mixed 5' read
BI856427.1 Clone IMAGE:5396567 mammary gland 5' read
BM546171.1 Clone IMAGE:5722634 ovary 5' read P
BM546920.1 Clone IMAGE:5723682 ovary 5' read P
W40356.1 Clone IMAGE:309246 lung 5' read
BM693147.1 Clone UI-E-CK1-afn-o-20-0-UI eye 5' read
BM693260.1 Clone UI-E-CK1-afm-k-19-0-UI eye 5' read
BM704189.1 Clone UI-E-CK1-afj-i-08-0-UI eye 5' read
BM704269.1 Clone UI-E-CK1-afj-p-11-0-UI eye 5' read
BM740451.1 Clone S5SNU484-3-C09 stomach 5' read
BM747780.1 Clone S5SNU484-18-F10 stomach 5' read
BM806872.1 Clone IMAGE:5738006 intestine 5' read
BM835960.1 Clone S5SNU484s1-17-F07 stomach 5' read
BM838962.1 Clone S5SNU484s1-21-D01 stomach 5' read
W87475.1 Clone IMAGE:417133 mixed 3' read
BQ446376.1 Clone UI-H-EU1-azz-f-23-0-UI connective tissue 3' read A
BQ637921.1 Clone hd16c02 eye 5' read
AA040378.1 Clone IMAGE:376016 heart 3' read A
AA040302.1 Clone IMAGE:376016 heart 5' read
AA040574.1 Clone IMAGE:376111 heart 3' read
AA040672.1 Clone IMAGE:376111 heart 5' read
AA126527.1 Clone IMAGE:502716 uterus 5' read
FN169945.1 Clone 288617_2223_2887
FN047108.1 Clone 002786_2747_0121
AA136872.1 Clone IMAGE:491052 uterus 3' read A
AA136802.1 Clone IMAGE:491052 uterus 5' read
BY997345.1 Clone MCT1701 5' read
BU685877.1 Clone UI-CF-DU1-adm-p-10-0-UI lung 3' read A
HY017918.1 Clone H04D060M03 testis
HY201111.1 Clone H04D060M03 testis
CA393635.1 Clone cs40f04 eye 5' read
AA284920.1 Clone IMAGE:713179 lymph node 3' read
AA425038.1 Clone IMAGE:768476 mixed 5' read
AA447953.1 Clone IMAGE:786181 embryonic tissue 5' read
AA448885.1 Clone IMAGE:786179 embryonic tissue 3' read A
AA495955.1 Clone IMAGE:768476 mixed 3' read
AA535913.1 Clone IMAGE:927566 intestine 3' read A
AA653361.1 Clone IMAGE:1127848 kidney 3' read
AA778262.1 Clone IMAGE:379914 heart 3' read A
AA883718.1 Clone IMAGE:1461547 mixed 3' read A
AA932457.1 Clone IMAGE:1572013 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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