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UGID:142362     UniGene Hs.98475     Homo sapiens (human)   PNKD
Paroxysmal nonkinesigenic dyskinesia (PNKD)

Human protein-coding gene PNKD. Represented by 391 ESTs from 178 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 142362 - Hs.98475]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001089254.1 PREDICTED: probable hydrolase PNKD M. mulatta 100.0 384
XP_003907995.1 PREDICTED: probable hydrolase PNKD isoform 2 P. anubis 100.0 384
NP_056303.3 PNKD gene product H. sapiens 100.0 384
NP_001034598.1 Pnkd gene product M. musculus 97.4 384
XP_001923240.1 PREDICTED: probable hydrolase PNKD D. rerio 65.0 319
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003309528.2 PREDICTED: probable hydrolase PNKD-like P. troglodytes 99.2 355
NP_001128222.1 myofibrillogenesis regulator 1 isoform 1 R. norvegicus 96.9 384

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; mouth; skin; ovary; adrenal gland; liver; muscle; placenta; heart; lung; intestine; uterus; embryonic tissue; eye; prostate; kidney; bone; uncharacterized tissue; connective tissue; lymph node; mammary gland; pituitary gland; blood; parathyroid; stomach; vascular; spleen; cervix; ascites; bone marrow; thyroid; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q35
UniSTS entry: Chr 2 RH64881
UniSTS entry: Chr 2 AI854243
UniSTS entry: Chr 2 HSC2KC082 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AL080092.1 Homo sapiens mRNA; cDNA DKFZp564N1362 (from clone DKFZp564N1362) PA
AY358753.1 Homo sapiens clone DNA96894 AWQG2491 (UNQ2491) mRNA, complete cds PA
AY358680.1 Homo sapiens clone DNA60281 AWQG2491 (UNQ2491) mRNA, complete cds
AB033010.1 Homo sapiens mRNA for KIAA1184 protein, partial cds P
BC002937.2 Homo sapiens paroxysmal nonkinesigenic dyskinesia, mRNA (cDNA clone MGC:10635 IMAGE:3956630), complete cds PA
NM_001077399.2 Homo sapiens paroxysmal nonkinesigenic dyskinesia (PNKD), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA PA
BC007543.1 Homo sapiens paroxysmal nonkinesiogenic dyskinesia, mRNA (cDNA clone IMAGE:2959415) PA
AF417001.1 Homo sapiens myofibrillogenesis regulator MR-1 mRNA, complete cds P
BC021118.1 Homo sapiens paroxysmal nonkinesigenic dyskinesia, mRNA (cDNA clone IMAGE:4861213), complete cds PA
AK289867.1 Homo sapiens cDNA FLJ75909 complete cds, highly similar to Homo sapiens myofibrillogenesis regulator 1 (MR-1), transcript variant 1, mRNA P
AK309308.1 Homo sapiens cDNA, FLJ99349 PA
NM_022572.4 Homo sapiens paroxysmal nonkinesigenic dyskinesia (PNKD), transcript variant 2, mRNA PA
NM_015488.4 Homo sapiens paroxysmal nonkinesigenic dyskinesia (PNKD), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
BC036457.2 Homo sapiens paroxysmal nonkinesigenic dyskinesia, mRNA (cDNA clone MGC:33461 IMAGE:4797574), complete cds PA
AF318057.1 Homo sapiens FKSG19 (FKSG19) mRNA, complete cds P

EST sequences (10 of 391) [Show all sequences]

AA903674.1 Clone IMAGE:1517726 uncharacterized tissue 3' read A
AA972616.1 Clone IMAGE:1583014 mixed 3' read PA
AA972872.1 Clone IMAGE:1576273 intestine 3' read
AA987751.1 Clone IMAGE:1601655 lung 3' read A
AA993519.1 Clone IMAGE:1623140 embryonic tissue 3' read PA
AA994091.1 Clone IMAGE:1630750 mammary gland 3' read A
AI004909.1 Clone IMAGE:1632123 mammary gland 3' read A
AI016054.1 Clone IMAGE:1636189 kidney 3' read A
AI022724.1 Clone IMAGE:1654163 mixed 3' read A
AI022728.1 Clone IMAGE:1654171 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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