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UGID:142264     UniGene Hs.98202     Homo sapiens (human)   C12orf54
Chromosome 12 open reading frame 54 (C12orf54)

Human protein-coding gene C12orf54. Represented by 28 ESTs from 7 cDNA libraries. EST representation biased toward testis. Corresponds to reference sequence NM_152319.3. [UniGene 142264 - Hs.98202]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_689532.1 C12orf54 gene product H. sapiens 100.0 126
Other hits (SpeciesId(%)Len(aa)
XP_003906340.1 PREDICTED: uncharacterized protein C12orf54 homolog P. anubis 89.4 112

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; brain; uncharacterized tissue; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13.11
UniSTS entry: Chr 12 RH92571
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AY255794.1 Homo sapiens HSD-30 mRNA, complete cds
AY255793.1 Homo sapiens HSD-29 mRNA, complete cds P
BC031670.2 Homo sapiens chromosome 12 open reading frame 54, mRNA (cDNA clone MGC:35033 IMAGE:5165130), complete cds PA
NM_152319.3 Homo sapiens chromosome 12 open reading frame 54 (C12orf54), mRNA PA

EST sequences (10 of 28) [Show all sequences]

AA994175.1 Clone IMAGE:1621258 testis 3' read A
AI017776.1 Clone IMAGE:1639022 testis 3' read A
AI205752.1 Clone IMAGE:1836877 testis 3' read A
AI215012.1 Clone IMAGE:1840145 testis 3' read A
AI221205.1 Clone IMAGE:1841538 mixed 3' read A
AA923201.1 Clone IMAGE:1523954 mixed 3' read A
AI424806.1 Clone IMAGE:2112098 mixed 3' read PA
BX280243.1 Clone IMAGp998C1911410_;_IMAGE:5165130 brain P
AW304048.1 Clone IMAGE:2814950 mixed 3' read A
BF510008.1 Clone IMAGE:3086963 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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