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UGID:141673     UniGene Hs.94542     Homo sapiens (human)   ALKBH1
AlkB, alkylation repair homolog 1 (E. coli) (ALKBH1)

Human protein-coding gene ALKBH1. Represented by 87 ESTs from 55 cDNA libraries. Corresponds to reference sequence NM_006020.2. [UniGene 141673 - Hs.94542]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_510096.2 PREDICTED: alkylated DNA repair protein alkB homolog 1 P. troglodytes 100.0 388
NP_006011.2 ALKBH1 gene product H. sapiens 100.0 388
NP_001096035.1 Alkbh1 gene product M. musculus 86.9 388
NP_001087992.1 alkB, alkylation repair homolog 1 X. laevis 66.3 350
NP_001018527.1 alkbh1 gene product D. rerio 65.6 355
NP_996458.1 AlkB D. melanogaster 46.1 167
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_003902162.1 PREDICTED: alkylated DNA repair protein alkB homolog 1 P. anubis 96.9 388
XP_002805207.1 PREDICTED: alkylated DNA repair protein alkB homolog 1-like M. mulatta 96.7 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mixed; uncharacterized tissue; lung; skin; stomach; connective tissue; ovary; adrenal gland; cervix; blood; eye; placenta; brain; uterus; kidney; intestine; spleen; ganglia; bone; testis; lymph node; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q24.3
UniSTS entry: Chr 14 STS-X91992
UniSTS entry: Chr 14 RH69686
UniSTS entry: Chr 14 RH46436 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_006020.2 Homo sapiens alkB, alkylation repair homolog 1 (E. coli) (ALKBH1), mRNA P
X91992.1 H.sapiens mRNA for alkB protein homolog PA
BC025787.1 Homo sapiens alkB, alkylation repair homolog 1 (E. coli), mRNA (cDNA clone MGC:34444 IMAGE:5229152), complete cds PA
BC015024.1 Homo sapiens alkB, alkylation repair homolog 1 (E. coli), mRNA (cDNA clone IMAGE:3910971), partial cds PA

EST sequences (10 of 87) [Show all sequences]

BX095987.1 Clone IMAGp998F155398_;_IMAGE:2184590 stomach A
BX105183.1 Clone IMAGp998O23675_;_IMAGE:301678 lung A
AI240118.1 Clone IMAGE:1846547 mixed 3' read P
AI246473.1 Clone IMAGE:1856387 mixed 3' read A
AI368879.1 Clone IMAGE:1991113 uterus 3' read A
AI377929.1 Clone IMAGE:2091738 mixed 3' read P
AI536743.1 Clone IMAGE:2184590 stomach 3' read A
AI572185.1 Clone IMAGE:2088909 mixed 3' read A
AI625784.1 Clone IMAGE:2284109 kidney 3' read A
AI668640.1 Clone IMAGE:301678 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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