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UGID:141490     UniGene Hs.92033     Homo sapiens (human)   ILKAP
Integrin-linked kinase-associated serine/threonine phosphatase (ILKAP)

Human protein-coding gene ILKAP. Represented by 213 ESTs from 133 cDNA libraries. Corresponds to reference sequence NM_030768.2. [UniGene 141490 - Hs.92033]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001152781.2 PREDICTED: integrin-linked kinase-associated serine/threonine phosphatase 2C P. troglodytes 100.0 391
NP_110395.1 ILKAP gene product H. sapiens 100.0 391
XP_003908199.1 PREDICTED: integrin-linked kinase-associated serine/threonine phosphatase 2C P. anubis 99.7 391
NP_075832.1 Ilkap gene product M. musculus 98.5 391
NP_001086890.1 integrin-linked kinase-associated serine/threonine phosphatase X. laevis 77.0 343
NP_001082973.2 integrin-linked kinase-associated serine/threonine phosphatase 2C D. rerio 72.9 340
NP_496370.2 Protein F33A8.6 C. elegans 48.6 208
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_001094705.2 PREDICTED: integrin-linked kinase-associated serine/threonine phosphatase 2C M. mulatta 99.5 391
XP_543305.3 PREDICTED: integrin-linked kinase-associated serine/threonine phosphatase 2C isoform 1 C. lupus familiaris 99.0 391

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; embryonic tissue; lung; kidney; ovary; thyroid; testis; intestine; mixed; pituitary gland; pancreas; skin; uterus; prostate; heart; mammary gland; spleen; thymus; trachea; muscle; cervix; ascites; placenta; stomach; blood; lymph node; connective tissue; nerve; salivary gland; mouth; bone; ganglia; vascular; eye; pineal gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q37.3
UniSTS entry: Chr 2 D2S1671E [Map Viewer]
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 PMC156606P2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BC050422.1 Homo sapiens integrin-linked kinase-associated serine/threonine phosphatase 2C, mRNA (cDNA clone IMAGE:6187993), with apparent retained intron PA
AK001043.1 Homo sapiens cDNA FLJ10181 fis, clone HEMBA1004227, highly similar to Homo sapiens integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP), transcript variant 1, mRNA P
CR533533.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0419D for gene ILKAP, integrin-linked kinase-associated serine/threonine phosphatase 2C; complete cds, incl. stopcodon P
AL136850.1 Homo sapiens mRNA; cDNA DKFZp434J2031 (from clone DKFZp434J2031) PA
AY024365.1 Homo sapiens integrin-linked kinase-associated serine/threonine phosphatase 2C mRNA, complete cds PA
NM_030768.2 Homo sapiens integrin-linked kinase-associated serine/threonine phosphatase (ILKAP), mRNA PA
BC006576.2 Homo sapiens integrin-linked kinase-associated serine/threonine phosphatase 2C, mRNA (cDNA clone MGC:4846 IMAGE:3604852), complete cds PA
FJ491381.1 Homo sapiens isolate C truncated integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP) mRNA, complete cds P
FJ491380.1 Homo sapiens isolate G truncated integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP) mRNA, complete cds P
BC035746.1 Homo sapiens cDNA clone IMAGE:5748660 PA
HQ658060.1 Homo sapiens integrin-linked kinase associated phosphatase (ILKAP3) mRNA, complete cds, alternatively spliced PA
HQ658059.1 Homo sapiens integrin-linked kinase associated phosphatase (ILKAP2) mRNA, complete cds, alternatively spliced PA

EST sequences (10 of 213) [Show all sequences]

AA992363.1 Clone IMAGE:1618897 testis 3' read PA
AI088415.1 Clone IMAGE:1696489 uterus 3' read PA
AI138415.1 Clone IMAGE:1736168 testis 3' read PA
AI143327.1 Clone IMAGE:1705538 heart 3' read A
AI143328.1 Clone IMAGE:1705540 heart 3' read A
CB045755.1 Clone IMAGE:3218359 intestine 3' read PA
BX105587.1 Clone IMAGp998B072675_;_IMAGE:1069350 kidney PA
AI205214.1 Clone IMAGE:1952611 brain 3' read
AI217079.1 Clone IMAGE:1732197 heart 3' read A
AI221343.1 Clone IMAGE:1841567 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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