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UGID:132429     UniGene Hs.8944     Homo sapiens (human)   PCOLCE2
Procollagen C-endopeptidase enhancer 2 (PCOLCE2)

Human protein-coding gene PCOLCE2. Represented by 194 ESTs from 93 cDNA libraries. Corresponds to reference sequence NM_013363.3. [UniGene 132429 - Hs.8944]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_037495.1 PCOLCE2 gene product H. sapiens 100.0 414
XP_516795.2 PREDICTED: procollagen C-endopeptidase enhancer 2 P. troglodytes 99.8 414
NP_083896.1 procollagen C-endopeptidase enhancer 2 precursor M. musculus 89.4 413
NP_001080499.1 procollagen C-endopeptidase enhancer 2 precursor X. laevis 87.2 404
NP_956754.1 pcolce2b gene product D. rerio 81.0 409
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_002803020.1 PREDICTED: procollagen C-endopeptidase enhancer 2-like M. mulatta 98.1 267
XP_003895056.1 PREDICTED: procollagen C-endopeptidase enhancer 2 P. anubis 97.7 395

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; connective tissue; uterus; mixed; heart; brain; kidney; lung; embryonic tissue; blood; pituitary gland; ovary; prostate; mammary gland; cervix; thymus; trachea; uncharacterized tissue; skin; ascites; bone; intestine; testis; liver; adipose tissue; spleen; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21-q24
UniSTS entry: Chr 3 RH12324
UniSTS entry: Chr 3 SHGC-33034 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AY358557.1 Homo sapiens clone DNA39969 PCOLCE2 (UNQ250) mRNA, complete cds PA
CR536570.1 Homo sapiens full open reading frame cDNA clone RZPDo834A1122D for gene PCOLCE2, procollagen C-endopeptidase enhancer 2; complete cds, incl. stopcodon P
NM_013363.3 Homo sapiens procollagen C-endopeptidase enhancer 2 (PCOLCE2), mRNA PA
AF098269.1 Homo sapiens procollagen C-terminal proteinase enhancer protein 2 (PCOLCE2) mRNA, complete cds P
AK223633.1 Homo sapiens mRNA for procollagen C-endopeptidase enhancer 2 variant, clone: FCC135F05 P
BC006265.2 Homo sapiens procollagen C-endopeptidase enhancer 2, mRNA (cDNA clone IMAGE:3951739) PA
AY035400.1 Homo sapiens procollagen C-proteinase enhancer protein 2 (PCPE2) mRNA, complete cds PA
AK315121.1 Homo sapiens cDNA, FLJ96084, Homo sapiens procollagen C-endopeptidase enhancer 2 (PCOLCE2),mRNA P
AK075478.1 Homo sapiens cDNA PSEC0172 fis, clone PLACE1011835, highly similar to Procollagen C-endopeptidase enhancer 2 precursor P

EST sequences (10 of 194) [Show all sequences]

AI052641.1 Clone IMAGE:1675672 mixed 3' read A
AI093329.1 Clone IMAGE:1695075 uterus 3' read P
AI127627.1 Clone IMAGE:1711131 uterus 3' read
BX112431.1 Clone IMAGp998A161168_;_IMAGE:490647 uterus P
AI185171.1 Clone IMAGE:1740545 lung 3' read A
AI189560.1 Clone IMAGE:1725003 placenta 3' read A
AI266553.1 Clone IMAGE:1899821 kidney 3' read A
CB161420.1 Clone L17N670205n1-44-D12 liver 5' read P
CB162347.1 Clone L17N670205n1-42-F05 liver 5' read P
AI277738.1 Clone IMAGE:1892186 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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