NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:130842     UniGene Hs.808     Homo sapiens (human)   HNRNPF
Heterogeneous nuclear ribonucleoprotein F (HNRNPF)

Human protein-coding gene HNRNPF. Represented by 2002 ESTs from 489 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 130842 - Hs.808]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002805665.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 2 M. mulatta 100.0 414
XP_003903619.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 1 P. anubis 100.0 414
NP_001233466.1 HNRNPF gene product P. troglodytes 100.0 414
NP_001091678.1 HNRNPF gene product H. sapiens 100.0 414
NP_598595.1 Hnrnpf gene product M. musculus 99.8 414
NP_071792.1 Hnrnpf gene product R. norvegicus 99.8 414
XP_002722547.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F-like O. cuniculus 99.5 414
XP_848697.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 3 C. lupus familiaris 99.5 413
NP_001086923.1 heterogeneous nuclear ribonucleoprotein H1 (H) X. laevis 80.0 455
NP_991247.1 hnrnph1 gene product D. rerio 79.0 400
NP_650120.1 glorund, isoform A D. melanogaster 46.9 179
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_001490069.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F-like isoform 1 E. caballus 99.0 413
XP_001929089.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform 5 S. scrofa 99.0 413

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; intestine; uncharacterized tissue; lung; thymus; uterus; skin; placenta; eye; embryonic tissue; liver; kidney; blood; prostate; pancreas; vascular; ascites; spleen; mixed; connective tissue; mammary gland; bladder; stomach; trachea; bone marrow; mouth; salivary gland; heart; pharynx; lymph; cervix; ovary; larynx; tonsil; thyroid; adrenal gland; nerve; bone; lymph node; esophagus; muscle; ganglia; pituitary gland; umbilical cord; epididymis; ear; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q11.21
UniSTS entry: Chr 1 RH17918 [Map Viewer]
UniSTS entry: Chr 10 SGC35271 [Map Viewer]
UniSTS entry: Chr 10 HNRPF_2089
UniSTS entry: RH125671
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

L28010.1 Homo sapiens HnRNP F protein mRNA, complete cds PA
NM_004966.3 Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 3, mRNA PA
AK001364.1 Homo sapiens cDNA FLJ10502 fis, clone NT2RP2000414, highly similar to Heterogeneous nuclear ribonucleoprotein F P
BC106008.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA clone MGC:110997 IMAGE:6156823), complete cds PA
BC001432.2 Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA clone MGC:2197 IMAGE:3138435), complete cds PA
BC004254.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA clone MGC:10565 IMAGE:3633625), complete cds PA
NM_001098206.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 5, mRNA PA
NM_001098204.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 2, mRNA PA
NM_001098205.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 4, mRNA PA
NM_001098207.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 6, mRNA PA
NM_001098208.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 1, mRNA PA
BC015580.2 Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA clone MGC:23274 IMAGE:4636807), complete cds PA
BC016736.1 Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA clone MGC:24536 IMAGE:4104978), complete cds PA
AB062287.1 Homo sapiens OK/SW-cl.23 mRNA for heterogeneous nuclear ribonucleoprotein F, complete cds PA
AK296696.1 Homo sapiens cDNA FLJ57121 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein F P

EST sequences (10 of 2002) [Show all sequences]

AA864851.1 Clone IMAGE:1456688 kidney 3' read A
AA962686.1 Clone IMAGE:1575437 intestine 3' read A
AA995096.1 Clone IMAGE:1625784 mixed 3' read A
AI000579.1 Clone IMAGE:1609169 mammary gland 3' read P
AA887444.1 Clone IMAGE:1500844 kidney 3' read
AI015681.1 Clone IMAGE:1636112 kidney 3' read P
AI016710.1 Clone IMAGE:1636221 kidney 3' read A
AI032430.1 Clone IMAGE:1631340 mammary gland 3' read PA
AI040135.1 Clone IMAGE:1655773 mixed 3' read A
AI089981.1 Clone IMAGE:1696162 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help