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UGID:140280     UniGene Hs.78913     Homo sapiens (human)   CX3CR1
Chemokine (C-X3-C motif) receptor 1 (CX3CR1)

Human protein-coding gene CX3CR1. Represented by 145 ESTs from 63 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 140280 - Hs.78913]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001164645.1 CX3CR1 gene product H. sapiens 100.0 386
NP_034117.3 Cx3cr1 gene product M. musculus 88.6 349
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
NP_001139725.1 CX3C chemokine receptor 1 P. troglodytes 99.4 354
XP_001084169.1 PREDICTED: CX3C chemokine receptor 1 isoform 1 M. mulatta 96.6 354

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; prostate; pancreas; uncharacterized tissue; lung; mammary gland; mouth; spleen; placenta; mixed; uterus; blood; trachea; thymus; liver; testis; thyroid; connective tissue; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p21.3
UniSTS entry: Chr 3 RH91803
UniSTS entry: Chr 3 PMC135988P14
UniSTS entry: Chr 3 RH18026
UniSTS entry: Chr 3 D3S2899E
UniSTS entry: Chr 3 CX3CR1_554
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_001337.3 Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), transcript variant 4, mRNA P
AK225764.1 Homo sapiens mRNA for chemokine (C-X3-C motif) receptor 1 variant, clone: FCC134C01 PA
U20350.1 Human G protein-coupled receptor V28 mRNA, complete cds P
AK307911.1 Homo sapiens cDNA, FLJ97859 P
AK312373.1 Homo sapiens cDNA, FLJ92697, highly similar to Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), mRNA P
BC028078.1 Homo sapiens chemokine (C-X3-C motif) receptor 1, mRNA (cDNA clone MGC:40024 IMAGE:5216452), complete cds PA
NM_001171174.1 Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), transcript variant 1, mRNA P
NM_001171172.1 Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), transcript variant 3, mRNA P
NM_001171171.1 Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), transcript variant 2, mRNA P
U28934.1 Human beta chemokine receptor-like 1 mRNA, complete cds P

EST sequences (10 of 145) [Show all sequences]

R15212.1 Clone IMAGE:29743 brain 5' read
R20955.1 Clone IMAGE:31466 brain 5' read
AI128038.1 Clone IMAGE:1712714 uterus 3' read
CB047889.1 Clone IMAGE:3270648 prostate 3' read A
CB047890.1 Clone IMAGE:3270648 prostate 5' read
R34908.1 Clone IMAGE:36847 brain 5' read
AI393440.1 Clone IMAGE:2111732 mixed 3' read
AI524504.1 Clone IMAGE:2181250 uterus 3' read
R42738.1 Clone IMAGE:31466 brain 3' read
AI400381.1 Clone IMAGE:2119543 prostate 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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