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UGID:140120     UniGene Hs.77578     Homo sapiens (human)   USP9X
Ubiquitin specific peptidase 9, X-linked (USP9X)

Human protein-coding gene USP9X. Represented by 797 ESTs from 303 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 140120 - Hs.77578]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001034679.2 USP9X gene product H. sapiens 100.0 2569
XP_003917644.1 PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like, partial P. anubis 100.0 1935
XP_002806244.1 PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X M. mulatta 99.8 2544
XP_002719892.1 PREDICTED: ubiquitin specific protease 9, X-linked-like isoform 1 O. cuniculus 99.7 2569
XP_001489487.2 PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 2 E. caballus 99.5 2569
XP_003317476.1 PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X P. troglodytes 99.5 2496
NP_033507.2 Usp9x gene product M. musculus 99.3 2553
NP_001070917.1 usp9 gene product D. rerio 93.5 2550
NP_733455.1 fat facets, isoform C D. melanogaster 56.0 2568
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
NP_001129395.1 probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 2 R. norvegicus 99.4 2553
XP_538002.3 PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 1 C. lupus familiaris 99.4 1871

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; brain; testis; mixed; placenta; embryonic tissue; uncharacterized tissue; uterus; intestine; kidney; vascular; spleen; skin; pharynx; ganglia; thymus; eye; mouth; mammary gland; blood; connective tissue; nerve; liver; pancreas; stomach; bone; heart; bladder; cervix; adrenal gland; ascites; muscle; lymph node; prostate; ovary; trachea; bone marrow; pituitary gland; thyroid; lymph; ear; adipose tissue; salivary gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.4
UniSTS entry: Chr X D20S998
UniSTS entry: Chr X RH125670
UniSTS entry: BG371737
UniSTS entry: Chr X SGC30689 [Map Viewer]
UniSTS entry: Chr X RH47975
UniSTS entry: Chr X WI-11070 [Map Viewer]
UniSTS entry: Chr X STS-N26828 [Map Viewer]
UniSTS entry: Chr X DFFR
UniSTS entry: Chr X USP9X_3261
UniSTS entry: Chr X RH48141 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AF070645.1 Homo sapiens clone 24650 ubiquitin hydrolase mRNA, partial cds PA
BC046205.1 Homo sapiens ubiquitin specific peptidase 9, X-linked, mRNA (cDNA clone IMAGE:6175281), partial cds PA
BC054861.1 Homo sapiens cDNA clone IMAGE:4041327, partial cds A
BC063645.1 Homo sapiens ubiquitin specific peptidase 9, X-linked, mRNA (cDNA clone IMAGE:4538919), partial cds PA
AB209666.1 Homo sapiens mRNA for USP9X protein variant protein P
NM_001039591.2 Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 4, mRNA P
NM_001039590.2 Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 3, mRNA P
AK294828.1 Homo sapiens cDNA FLJ60509 complete cds, highly similar to Probable ubiquitin carboxyl-terminalhydrolase FAF-X (EC 3.1.2.15) P
BC014792.1 Homo sapiens, clone IMAGE:3857207, mRNA A
AJ012078.1 Homo sapiens mRNA for fat facets protein, 3' end
X98296.1 H.sapiens mRNA for ubiquitin hydrolase P

EST sequences (10 of 797) [Show all sequences]

AA954273.1 Clone IMAGE:1562248 mixed 3' read
R14140.1 Clone IMAGE:28399 brain 5' read
AA971832.1 Clone IMAGE:1584744 lung 3' read A
AA977032.1 Clone IMAGE:1586910 uncharacterized tissue 3' read
AI005005.1 Clone IMAGE:1625569 mixed 3' read
AI018262.1 Clone IMAGE:1626775 mixed 3' read PA
AI022439.1 Clone IMAGE:1654701 mixed 3' read
R18601.1 Clone IMAGE:30394 brain 5' read P
AI074353.1 Clone IMAGE:1682036 skin 3' read
AI078835.1 Clone IMAGE:1678379 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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