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UGID:6280428     UniGene Hs.744928     Homo sapiens (human)   PTPRS
Protein tyrosine phosphatase, receptor type, S (PTPRS)

Human protein-coding gene PTPRS. Represented by 195 ESTs from 103 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 6280428 - Hs.744928]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002841.3 PTPRS gene product H. sapiens 100.0 1947
XP_003914761.1 PREDICTED: receptor-type tyrosine-protein phosphatase S isoform 2 P. anubis 99.9 1947
XP_003316068.1 PREDICTED: receptor-type tyrosine-protein phosphatase S isoform 3 P. troglodytes 99.9 1947
NP_035348.2 Ptprs gene product M. musculus 96.2 1906
XP_001920953.3 PREDICTED: receptor-type tyrosine-protein phosphatase S D. rerio 82.2 1909
NP_001083850.1 protein tyrosine phosphatase, receptor type, D precursor X. laevis 80.4 1878
NP_001021944.1 Protein PTP-3, isoform c C. elegans 62.4 578
NP_001246094.1 Leukocyte-antigen-related-like, isoform D D. melanogaster 58.3 1894
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001083499.2 PREDICTED: receptor-type tyrosine-protein phosphatase S M. mulatta 98.7 1841
XP_003354061.2 PREDICTED: receptor-type tyrosine-protein phosphatase S S. scrofa 98.1 1830

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: uncharacterized tissue; brain; lung; prostate; embryonic tissue; pituitary gland; eye; mixed; mammary gland; testis; lymph node; larynx; blood; heart; intestine; connective tissue; ovary; placenta; bone; pancreas; skin; thyroid; kidney; bladder; nerve; uterus; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.3
UniSTS entry: Chr 19 STS-N38920
UniSTS entry: Chr 19 RH66535
UniSTS entry: Chr 1 fj50d02.y1
UniSTS entry: RH47825
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

U41725.1 Human protein tyrosine phosphatase PTPsigma-(brain) (PTPsigma) mRNA, complete cds P
NM_002850.3 Homo sapiens protein tyrosine phosphatase, receptor type, S (PTPRS), transcript variant 1, mRNA P
AB209333.1 Homo sapiens mRNA for protein tyrosine phosphatase, receptor type, sigma isoform 3 precursor variant protein P
BC104812.1 Homo sapiens protein tyrosine phosphatase, receptor type, S, mRNA (cDNA clone MGC:132472 IMAGE:8143815), complete cds P
U35234.1 Human protein tyrosine phosphatase sigma mRNA, complete cds P
BC148297.2 Homo sapiens protein tyrosine phosphatase, receptor type, S, mRNA (cDNA clone IMAGE:40120356), partial cds P
U40317.1 Human protein tyrosine phosphatase PTPsigma (PTPsigma) mRNA, complete cds P
NM_130855.2 Homo sapiens protein tyrosine phosphatase, receptor type, S (PTPRS), transcript variant 4, mRNA P
NM_130854.2 Homo sapiens protein tyrosine phosphatase, receptor type, S (PTPRS), transcript variant 2, mRNA P
NM_130853.2 Homo sapiens protein tyrosine phosphatase, receptor type, S (PTPRS), transcript variant 3, mRNA P
BC029496.1 Homo sapiens protein tyrosine phosphatase, receptor type, S, mRNA (cDNA clone IMAGE:5272670), complete cds PA
S78080.1 Homo sapiens protein-tyrosine phosphatase (BPTP-1) mRNA, partial cds P
S78086.1 Homo sapiens protein-tyrosine phosphatase (BPTP-2) mRNA, partial cds P
BC143287.1 Homo sapiens protein tyrosine phosphatase, receptor type, S, mRNA (cDNA clone MGC:176807 IMAGE:9051790), complete cds P
BC143286.1 Homo sapiens cDNA clone IMAGE:9051789 P

EST sequences (10 of 195) [Show all sequences]

CB049299.1 Clone IMAGE:3271528 prostate 3' read A
AI084603.1 Clone IMAGE:1681420 skin 3' read A
AI215786.1 Clone IMAGE:1883788 lung 3' read A
AI201431.1 Clone IMAGE:1943732 prostate 3' read A
AI277876.1 Clone IMAGE:1892153 placenta 3' read A
AI201875.1 Clone IMAGE:1944267 prostate 3' read A
AI283502.1 Clone IMAGE:1854658 mixed 3' read P
AI432394.1 Clone IMAGE:2114379 mixed 3' read A
AI676100.1 Clone IMAGE:2314279 prostate 3' read A
CB243033.1 Clone UI-CF-FN0-agb-j-06-0-UI lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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