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UGID:6280377     UniGene Hs.744877     Homo sapiens (human)   USO1
USO1 vesicle transport factor (USO1)

Human protein-coding gene USO1. Represented by 787 ESTs from 275 cDNA libraries. Corresponds to reference sequence NM_003715.2. [UniGene 6280377 - Hs.744877]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001153352.1 PREDICTED: general vesicular transport factor p115 isoform 3 P. troglodytes 100.0 972
NP_003706.1 USO1 gene product H. sapiens 100.0 961
XP_001100314.2 PREDICTED: general vesicular transport factor p115-like isoform 1 M. mulatta 99.6 972
XP_003898795.1 PREDICTED: general vesicular transport factor p115 P. anubis 99.6 945
NP_062363.1 general vesicular transport factor p115 M. musculus 97.0 958
NP_001084785.1 USO1 vesicle docking protein homolog X. laevis 86.3 955
XP_002660510.1 PREDICTED: USO1 homolog, vesicle docking protein-like D. rerio 85.3 950
NP_572417.1 p115 D. melanogaster 60.2 817
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_002717055.1 PREDICTED: USO1 homolog, vesicle docking protein O. cuniculus 98.5 965
NP_777270.2 USO1 gene product B. taurus 98.3 960

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: brain; testis; embryonic tissue; trachea; placenta; uterus; blood; nerve; thyroid; spleen; uncharacterized tissue; mixed; eye; bladder; prostate; pancreas; liver; muscle; vascular; skin; lung; kidney; connective tissue; mammary gland; lymph node; mouth; heart; adipose tissue; intestine; parathyroid; bone; thymus; bone marrow; lymph; cervix; pharynx; stomach; pituitary gland; salivary gland; ear; larynx; ascites; ovary; esophagus; umbilical cord; adrenal gland
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.1
UniSTS entry: Chr 4 G19677
UniSTS entry: Chr 4 A001V03
UniSTS entry: Chr 4 RH46891 [Map Viewer]
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_003715.2 Homo sapiens USO1 vesicle transport factor (USO1), mRNA P
AK002093.1 Homo sapiens cDNA FLJ11231 fis, clone PLACE1008402, highly similar to Homo sapiens mRNA for p115 P
AK314289.1 Homo sapiens cDNA, FLJ95045, highly similar to Homo sapiens vesicle docking protein p115 (VDP), mRNA P
BC032654.1 Homo sapiens USO1 homolog, vesicle docking protein (yeast), mRNA (cDNA clone MGC:45332 IMAGE:5533256), complete cds PA
AL833753.1 Homo sapiens mRNA; cDNA DKFZp666A177 (from clone DKFZp666A177) PA
AL832010.2 Homo sapiens mRNA; cDNA DKFZp451D234 (from clone DKFZp451D234); complete cds PA
BC016672.1 Homo sapiens cDNA clone IMAGE:4385813, containing frame-shift errors PA
BC006398.2 Homo sapiens USO1 homolog, vesicle docking protein (yeast), mRNA (cDNA clone IMAGE:4301168), partial cds PA
D86326.1 Homo sapiens mRNA for p115, complete cds P

EST sequences (10 of 787) [Show all sequences]

AA969855.1 Clone IMAGE:1579424 mixed 3' read P
AA992815.1 Clone IMAGE:1623545 embryonic tissue 3' read A
AI033920.1 Clone IMAGE:1647021 parathyroid 3' read A
AA948155.1 Clone IMAGE:1588108 uncharacterized tissue 3' read P
AI079863.1 Clone IMAGE:1678739 skin 3' read A
AA862577.1 Clone IMAGE:1469498 uncharacterized tissue 3' read P
AA947573.1 Clone IMAGE:1508446 mixed 3' read A
AI208032.1 Clone IMAGE:1839609 testis 3' read A
CB156897.1 Clone L17N670205n1-5-E05 liver 5' read
AI276364.1 Clone IMAGE:1990574 uterus 3' read A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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