NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:5866809     UniGene Hs.740364     Homo sapiens (human)   CHERP
Calcium homeostasis endoplasmic reticulum protein (CHERP)

Human protein-coding gene CHERP. Represented by 468 ESTs from 196 cDNA libraries. Corresponds to reference sequence NM_006387.5. [UniGene 5866809 - Hs.740364]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003915158.1 PREDICTED: calcium homeostasis endoplasmic reticulum protein P. anubis 100.0 915
NP_006378.3 CHERP gene product H. sapiens 100.0 915
XP_001112800.1 PREDICTED: calcium homeostasis endoplasmic reticulum protein-like isoform 2 M. mulatta 99.9 915
NP_613051.3 Cherp gene product M. musculus 97.8 927
NP_001087514.1 calcium homeostasis endoplasmic reticulum protein X. laevis 89.3 926
NP_956368.2 cherp gene product D. rerio 82.9 907
NP_001246811.1 scaf6, isoform D D. melanogaster 47.4 312
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_852773.2 PREDICTED: calcium homeostasis endoplasmic reticulum protein C. lupus familiaris 99.2 915
XP_001914926.1 PREDICTED: LOW QUALITY PROTEIN: calcium homeostasis endoplasmic reticulum protein E. caballus 99.0 915

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; testis; embryonic tissue; mixed; lymph node; skin; placenta; blood; uterus; eye; lymph; adrenal gland; ovary; thymus; liver; prostate; intestine; muscle; cervix; kidney; mammary gland; larynx; connective tissue; heart; pancreas; bladder; mouth; ascites; spleen; esophagus; salivary gland; thyroid; adipose tissue; bone; nerve; parathyroid; trachea
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.1
UniSTS entry: Chr 19 G19773
UniSTS entry: Chr 19 A001Y07 [Map Viewer]
UniSTS entry: Chr 19 RH16018
UniSTS entry: Chr 19 D19S680E [Map Viewer]
UniSTS entry: Chr 19 G60283
UniSTS entry: Chr 19 RH93501
UniSTS entry: Chr 19 G64277
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_006387.5 Homo sapiens calcium homeostasis endoplasmic reticulum protein (CHERP), mRNA P
AB209730.1 Homo sapiens mRNA for calcium homeostasis endoplasmic reticulum protein variant protein P
BC021294.2 Homo sapiens calcium homeostasis endoplasmic reticulum protein, mRNA (cDNA clone MGC:29449 IMAGE:4053575), complete cds PA
AK298408.1 Homo sapiens cDNA FLJ51519 complete cds, highly similar to Homo sapiens calcium homeostasis endoplasmic reticulum protein (CHERP), mRNA P
AK296883.1 Homo sapiens cDNA FLJ51520 complete cds, highly similar to Homo sapiens calcium homeostasis endoplasmic reticulum protein (CHERP), mRNA P
BC001552.2 Homo sapiens calcium homeostasis endoplasmic reticulum protein, mRNA (cDNA clone IMAGE:3457864) P
Y08265.1 H.sapiens mRNA for DAN26 protein, partial P
AF536542.1 Homo sapiens SR-related CTD associated factor 6 (SCAF6) mRNA, complete cds PA
U94836.2 Homo sapiens ERPROT 213-21 mRNA, complete cds P

EST sequences (10 of 468) [Show all sequences]

AA996208.1 Clone IMAGE:1604123 lung 3' read A
AA904992.1 Clone IMAGE:1504182 mixed 3' read P
AI002027.1 Clone IMAGE:1637790 mammary gland 3' read P
R17858.1 Clone IMAGE:31787 brain 5' read
AI024437.1 Clone IMAGE:1641710 testis 3' read A
AI088548.1 Clone IMAGE:1696034 uterus 3' read A
AI091894.1 Clone IMAGE:1694211 heart 3' read A
AA923338.1 Clone IMAGE:1526342 mixed 3' read
AI123240.1 Clone IMAGE:1689913 mixed 3' read A
AI126640.1 Clone IMAGE:1736076 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help