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UGID:4540691     UniGene Hs.729090     Homo sapiens (human)   HKR1
HKR1, GLI-Kruppel zinc finger family member (HKR1)

Human protein-coding gene HKR1. Represented by 200 ESTs from 120 cDNA libraries. Corresponds to reference sequence NM_181786.2. [UniGene 4540691 - Hs.729090]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_861451.1 HKR1 gene product H. sapiens 100.0 658
XP_003198446.1 PREDICTED: zinc finger protein 658-like D. rerio 51.7 468
NP_080726.3 GLI-Kruppel family member HKR1 isoform a M. musculus 51.1 730
NP_001086606.1 zinc finger protein 484 X. laevis 49.5 430
NP_001097305.1 combgap, isoform F D. melanogaster 48.1 243
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_003316347.1 PREDICTED: Krueppel-related zinc finger protein 1 isoform 1 P. troglodytes 99.1 657
XP_001117982.2 PREDICTED: krueppel-related zinc finger protein 1 M. mulatta 97.4 579

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; uncharacterized tissue; mouth; pituitary gland; embryonic tissue; mixed; blood; testis; intestine; thyroid; ovary; lung; uterus; kidney; stomach; prostate; trachea; thymus; epididymis; connective tissue; spleen; placenta; mammary gland; skin; lymph node; cervix; adrenal gland; vascular; ascites; muscle; liver; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.12
UniSTS entry: Chr 19 RH15944
UniSTS entry: Chr 19 HKR1
UniSTS entry: Chr 1 D16S325
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC053845.1 Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone MGC:61630 IMAGE:5493685), complete cds PA
NM_181786.2 Homo sapiens HKR1, GLI-Kruppel zinc finger family member (HKR1), mRNA PA
AB013897.1 Homo sapiens mRNA for HKR1, partial cds P
AK223616.1 Homo sapiens mRNA for Krueppel-related zinc finger protein 1 (HKR1 protein) variant, clone: FCC133G03 PA
BC004513.2 Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone IMAGE:3928207), partial cds PA
AK307852.1 Homo sapiens cDNA, FLJ97800 P
AK301601.1 Homo sapiens cDNA FLJ54315 complete cds, moderately similar to Krueppel-related zinc finger protein 1 P
AK299969.1 Homo sapiens cDNA FLJ54309 complete cds, highly similar to Krueppel-related zinc finger protein 1 P
BC010024.2 Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone IMAGE:2988856), partial cds PA
BC017256.2 Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone MGC:29642 IMAGE:3356680), complete cds PA

EST sequences (10 of 200) [Show all sequences]

AI016684.1 Clone IMAGE:1635657 kidney 3' read A
AI081665.1 Clone IMAGE:1632514 mammary gland 3' read A
AI289399.1 Clone IMAGE:1992800 uterus 3' read A
AI361705.1 Clone IMAGE:2021887 uncharacterized tissue 3' read A
AI364896.1 Clone IMAGE:2010405 uncharacterized tissue 3' read A
AI420536.1 Clone IMAGE:2094802 prostate 3' read A
AI440109.1 Clone IMAGE:2134523 lymph node 3' read A
AI655251.1 Clone IMAGE:2310814 uncharacterized tissue 3' read A
AI656184.1 Clone IMAGE:2243086 uncharacterized tissue 3' read A
AL047439.1 Clone DKFZp586I0320 uterus P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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