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UGID:3881811     UniGene Hs.722032     Homo sapiens (human)   SRRM5
Serine/arginine repetitive matrix 5 (SRRM5)

Human protein-coding gene SRRM5. Represented by 27 ESTs from 18 cDNA libraries. Corresponds to reference sequence NM_001145641.1. [UniGene 3881811 - Hs.722032]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001139113.1 serine/arginine repetitive matrix protein 5 H. sapiens 100.0 714
NP_666295.2 Zfp428 gene product M. musculus 61.4 163
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_003953564.1 PREDICTED: serine/arginine repetitive matrix protein 5 P. troglodytes 93.2 705
XP_002723144.1 PREDICTED: zinc finger protein 428 isoform 1 O. cuniculus 90.5 157

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; pancreas; spleen; blood; lung; intestine; mixed; eye; embryonic tissue; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.31
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AK093056.1 Homo sapiens cDNA FLJ35737 fis, clone TESTI2003579, weakly similar to Mus musculus serine/arginine repetitive matrix 2 (Srrm2), mRNA PA
NM_001145641.1 Homo sapiens serine/arginine repetitive matrix 5 (SRRM5), mRNA PA
BC034980.1 Homo sapiens hypothetical LOC100170229, mRNA (cDNA clone IMAGE:4824581), partial cds PA

EST sequences (10 of 27) [Show all sequences]

CD244029.1 Clone IMAGE:30377613 testis 5' read P
CD580073.2 Clone MPMGp800O11509 brain 5' read P
CN355564.1 embryonic tissue 5' read P
BE909326.1 Clone IMAGE:3904772 pancreas 5' read P
DB037170.1 Clone TESTI2023103 testis 5' read P
DB022598.1 Clone TESTI2003579 testis 5' read P
DA950967.1 Clone SPLEN2028136 spleen 5' read P
DB336111.1 Clone TESTI2003579 testis 3' read A
DB299997.1 Clone BRACE3030817 brain 3' read A
BF896762.1 blood


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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