NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:2976951     UniGene Hs.696346     Homo sapiens (human)   SYT15
Synaptotagmin XV (SYT15)

Human protein-coding gene SYT15. Represented by 60 ESTs from 41 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2976951 - Hs.696346]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_114118.2 SYT15 gene product H. sapiens 100.0 420
NP_852682.1 Syt15 gene product M. musculus 81.8 417
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001156614.2 PREDICTED: synaptotagmin-15 isoform 1 P. troglodytes 98.6 420
XP_003903704.1 PREDICTED: synaptotagmin-15 isoform 1 P. anubis 96.2 475

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; lung; muscle; embryonic tissue; heart; prostate; eye; amniotic fluid; bladder; ovary; vascular; trachea; stomach; thymus; kidney; epididymis; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q11.1
UniSTS entry: Chr 10 RH79784
UniSTS entry: Chr 1 D11S3316
UniSTS entry: Chr 1 GDB:335751
UniSTS entry: Chr 10 SHGC-36518
UniSTS entry: Chr 10 RH102748
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D8S2279
UniSTS entry: Chr 10 SHGC-57655
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AB109023.1 Homo sapiens syt XV-b mRNA for synaptotagmin XV-b, complete cds P
AB109022.1 Homo sapiens syt XV-a mRNA for synaptotagmin XV-a, complete cds P
NM_031912.4 Homo sapiens synaptotagmin XV (SYT15), transcript variant a, mRNA P
NM_181519.2 Homo sapiens synaptotagmin XV (SYT15), transcript variant b, mRNA P
AK131036.1 Homo sapiens cDNA FLJ29001 fis, clone CBL08678 P
AK128634.1 Homo sapiens cDNA FLJ46793 fis, clone TRACH3029592
AK127436.1 Homo sapiens cDNA FLJ45528 fis, clone BRTHA2027250, weakly similar to Synaptotagmin B P
BC139914.1 Homo sapiens synaptotagmin XV, mRNA (cDNA clone MGC:164845 IMAGE:40147906), complete cds PA
AK290186.1 Homo sapiens cDNA FLJ76237 complete cds, highly similar to Homo sapiens synaptotagmin XV (SYT15), transcript variant a, mRNA P
AK293632.1 Homo sapiens cDNA FLJ53718 complete cds, highly similar to Synaptotagmin-15 P
AJ303363.1 Homo sapiens partial mRNA for synaptotagmin 15 (SYT15 gene) P

EST sequences (10 of 60) [Show all sequences]

AI056618.1 Clone IMAGE:1674961 mixed 3' read
AI076321.1 Clone IMAGE:1673573 mixed 3' read
AI685755.1 Clone IMAGE:2253270 prostate 3' read PA
AI796878.1 Clone IMAGE:2341933 lung 3' read A
AI971263.1 Clone IMAGE:2488898 prostate 3' read PA
BX483311.1 Clone DKFZp686M02235 muscle 5' read
AW206939.1 Clone IMAGE:2723030 mixed 3' read A
AW814874.1 stomach
AW873574.1 Clone IMAGE:3041976 mixed 3' read
CN285302.1 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help