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UGID:2733787     UniGene Hs.664469     Homo sapiens (human)   TUBA4B
Tubulin, alpha 4b (pseudogene) (TUBA4B)

Human pseudo gene TUBA4B. Represented by 15 ESTs from 13 cDNA libraries. Corresponds to reference sequence NR_003063.1. [UniGene 2733787 - Hs.664469]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003460407.1 PREDICTED: tubulin alpha-1B chain-like, partial O. niloticus 95.6 227
NP_033473.1 Tuba4a gene product M. musculus 90.4 447
NP_005991.1 TUBA4A gene product H. sapiens 90.4 447
NP_001098596.2 tuba1l gene product D. rerio 89.8 450
NP_001087937.1 tubulin, alpha 4b X. laevis 89.3 447
NP_476772.1 alpha-Tubulin at 84B D. melanogaster 87.4 445
NP_497663.1 Protein MEC-12 C. elegans 85.1 449
XP_001691876.1 alpha tubulin 1 C. reinhardtii 75.8 450
NP_849388.1 tubulin alpha-6 chain A. thaliana 73.5 370
XP_963223.1 tubulin alpha-B chain N. crassa 71.8 372
NP_013625.1 Tub1p S. cerevisiae 70.2 369
Other hits (2 of 68) [Show all]SpeciesId(%)Len(aa)
NP_001007005.1 Tuba4a gene product R. norvegicus 90.4 447
XP_001101117.1 PREDICTED: tubulin alpha-4A chain isoform 9 M. mulatta 90.4 447

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pharynx; stomach; muscle; brain; eye; lung; pineal gland; placenta; lymph; salivary gland; testis; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q35
UniSTS entry: Chr 2 RH78682
UniSTS entry: Chr 12 D11S4432
UniSTS entry: Chr 2 TUBA4__5160
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK024002.1 Homo sapiens cDNA FLJ13940 fis, clone Y79AA1000833, moderately similar to TUBULIN ALPHA-1 CHAIN P
BC121127.1 Homo sapiens cDNA clone IMAGE:40120714, containing frame-shift errors P
BC121126.1 Homo sapiens cDNA clone IMAGE:40120711, containing frame-shift errors P
NR_003063.1 Homo sapiens tubulin, alpha 4b (pseudogene) (TUBA4B), non-coding RNA P

EST sequences (15)

AI149066.1 Clone IMAGE:1716016 placenta 3' read P
BX279921.1 Clone IMAGp998B07967_;_IMAGE:413478 pineal gland P
CD698522.1 pharynx P
AW388999.1 stomach
BF310106.1 Clone IMAGE:4122029 muscle 5' read P
AA716340.1 Clone IMAGE:413478 pineal gland 3' read P
DA412201.1 Clone BRTHA3019663 brain 5' read
AU142757.1 Clone Y79AA1000833 eye 5' read P
BG483961.1 Clone IMAGE:4618069 lung 5' read P
BG536778.1 Clone IMAGE:4690923 lung 5' read
BG541833.1 Clone IMAGE:4693974 lung 5' read P
BM478094.1 Clone IMAGE:5552735 lymph 5' read P
BQ669594.1 Clone IMAGE:6275898 salivary gland 5' read P
AA668535.1 Clone IMAGE:859835 testis 3' read
AA912388.1 Clone IMAGE:1537722 ganglia 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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