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UGID:2731652     UniGene Hs.662334     Homo sapiens (human)   SYTL5
Synaptotagmin-like 5 (SYTL5)

Human protein-coding gene SYTL5. Represented by 29 ESTs from 20 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 2731652 - Hs.662334]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001156806.1 SYTL5 gene product H. sapiens 100.0 751
XP_528937.3 PREDICTED: synaptotagmin-like 5 P. troglodytes 99.6 751
NP_808372.1 Sytl5 gene product M. musculus 84.2 752
XP_686619.5 PREDICTED: synaptotagmin-like protein 5-like D. rerio 54.0 658
NP_001086460.1 synaptotagmin-like 4 X. laevis 50.8 238
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003917620.1 PREDICTED: synaptotagmin-like protein 5 P. anubis 96.9 751
XP_002808570.1 PREDICTED: LOW QUALITY PROTEIN: synaptotagmin-like protein 5-like, partial M. mulatta 96.7 641

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; embryonic tissue; mammary gland; brain; skin; uncharacterized tissue; prostate; mouth; uterus; trachea; eye; muscle; lung; testis; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp21.1
UniSTS entry: Chr X RH98374
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BX647688.1 Homo sapiens mRNA; cDNA DKFZp779C093 (from clone DKFZp779C093) PA
AK125106.1 Homo sapiens cDNA FLJ43116 fis, clone CTONG3002127, weakly similar to Mus musculus synaptotagmin-like 4 (Sytl4) P
BC131585.1 Homo sapiens synaptotagmin-like 5, mRNA (cDNA clone MGC:149278 IMAGE:40113205), complete cds P
AB080222.1 Homo sapiens slp5 mRNA for synaptotagmin-like protein 5, complete cds P
NM_138780.2 Homo sapiens synaptotagmin-like 5 (SYTL5), transcript variant 1, mRNA PA
NM_001163335.1 Homo sapiens synaptotagmin-like 5 (SYTL5), transcript variant 2, mRNA PA
NM_001163334.1 Homo sapiens synaptotagmin-like 5 (SYTL5), transcript variant 3, mRNA PA

EST sequences (10 of 29) [Show all sequences]

CB050877.1 Clone IMAGE:3272305 prostate 3' read
BX105255.1 Clone IMAGp998C131824_;_IMAGE:742596 testis
AI867872.1 Clone IMAGE:2308077 uncharacterized tissue 3' read A
AW020294.1 Clone IMAGE:2482720 ear 5' read
AL121523.1 Clone DKFZp762D068 skin 5' read A
AL135038.1 Clone DKFZp762M1611 skin 5' read
AW263497.1 Clone IMAGE:2700754 mixed 3' read A
CN283907.1 embryonic tissue 5' read
CN287384.1 embryonic tissue 5' read
BE073940.1 mammary gland


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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