NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:2728924     UniGene Hs.659606     Homo sapiens (human)   ACSM5
Acyl-CoA synthetase medium-chain family member 5 (ACSM5)

Human protein-coding gene ACSM5. Represented by 101 ESTs from 45 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_017888.2. [UniGene 2728924 - Hs.659606]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060358.2 ACSM5 gene product H. sapiens 100.0 578
NP_848873.1 acyl-coenzyme A synthetase ACSM5, mitochondrial precursor M. musculus 88.6 577
NP_001086370.1 acyl-CoA synthetase medium-chain family member 3 X. laevis 65.3 556
NP_001104706.1 acsm3 gene product D. rerio 61.3 532
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_001156353.1 PREDICTED: acyl-coenzyme A synthetase ACSM5, mitochondrial isoform 3 P. troglodytes 98.8 578
XP_003916673.1 PREDICTED: LOW QUALITY PROTEIN: acyl-coenzyme A synthetase ACSM5, mitochondrial P. anubis 97.0 570

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; kidney; brain; mixed; mammary gland; pharynx; adrenal gland; mouth; heart; placenta; testis; uncharacterized tissue; muscle; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.3
UniSTS entry: Chr 16 SHGC-56399
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC068516.1 Homo sapiens acyl-CoA synthetase medium-chain family member 5, mRNA (cDNA clone MGC:87308 IMAGE:5261244), complete cds PA
AK000588.1 Homo sapiens cDNA FLJ20581 fis, clone REC00491 P
NM_017888.2 Homo sapiens acyl-CoA synthetase medium-chain family member 5 (ACSM5), mRNA PA
BC013753.1 Homo sapiens acyl-CoA synthetase medium-chain family member 5, mRNA (cDNA clone IMAGE:4469679), complete cds PA
BC016703.1 Homo sapiens acyl-CoA synthetase medium-chain family member 5, mRNA (cDNA clone IMAGE:4069865), complete cds PA

EST sequences (10 of 101) [Show all sequences]

BX116869.1 Clone IMAGp998M14631_;_IMAGE:284725 brain P
CB158491.1 Clone L19N779227-1-H02 liver 5' read P
AI248775.1 Clone IMAGE:1849710 mixed 3' read
AI279773.1 Clone IMAGE:1899574 kidney 3' read
AI305817.1 Clone IMAGE:1900157 kidney 3' read
AI433320.1 Clone IMAGE:2138906 kidney 3' read
AI436700.1 Clone IMAGE:2130513 kidney 5' read
AI401824.1 Clone IMAGE:2119703 prostate 3' read
AI636297.1 Clone IMAGE:2296199 kidney 3' read
AI733019.1 Clone IMAGE:1471822 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help