NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:2727296     UniGene Hs.657978     Homo sapiens (human)   CTXN1
Cortexin 1 (CTXN1)

Human protein-coding gene CTXN1. Represented by 70 ESTs from 43 cDNA libraries. Corresponds to reference sequence NM_206833.3. [UniGene 2727296 - Hs.657978]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001093022.1 PREDICTED: cortexin-1 M. mulatta 100.0 81
XP_001156296.2 PREDICTED: cortexin-1 isoform 1 P. troglodytes 100.0 81
NP_996664.1 CTXN1 gene product H. sapiens 100.0 81
XP_003123247.1 PREDICTED: cortexin-1-like S. scrofa 100.0 81
NP_001098964.1 CTXN1 gene product B. taurus 100.0 81
XP_002722050.1 PREDICTED: cortexin 1 O. cuniculus 100.0 81
NP_899138.1 Ctxn1 gene product M. musculus 96.3 81
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_003919437.1 PREDICTED: cortexin-1 P. anubis 98.8 81
NP_001034143.1 CTXN1 gene product C. lupus familiaris 98.8 81

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; prostate; pancreas; mixed; lung; kidney; embryonic tissue; uterus; testis; bone marrow; intestine; skin; salivary gland; mammary gland; bone; pituitary gland; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC062702.1 Homo sapiens cortexin 1, mRNA (cDNA clone MGC:71984 IMAGE:4280819), complete cds PA
NM_206833.3 Homo sapiens cortexin 1 (CTXN1), mRNA PA
BC024148.2 Homo sapiens cortexin 1, mRNA (cDNA clone IMAGE:3937520), partial cds A
AK098834.1 Homo sapiens cDNA FLJ25968 fis, clone CBR01977 P
BC040420.2 Homo sapiens cDNA clone IMAGE:4215236 P

EST sequences (10 of 70) [Show all sequences]

AI142532.1 Clone IMAGE:1702821 brain 3' read
AI201314.1 Clone IMAGE:1755460 testis 3' read A
AI363013.1 Clone IMAGE:2018455 brain 3' read A
AI492616.1 Clone IMAGE:2020324 brain 3' read A
AI589670.1 Clone IMAGE:2162403 brain 3' read A
AI697206.1 Clone IMAGE:2209037 uterus 3' read A
AI742002.1 Clone IMAGE:2367299 mixed 3' read A
AI865712.1 Clone IMAGE:2418826 prostate 3' read A
AI884683.1 Clone IMAGE:2431495 brain 3' read A
AI868025.1 Clone IMAGE:2042951 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help