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UGID:139115     UniGene Hs.65734     Homo sapiens (human)   ARNTL
Aryl hydrocarbon receptor nuclear translocator-like (ARNTL)

Human protein-coding gene ARNTL. Represented by 213 ESTs from 120 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 139115 - Hs.65734]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001095200.1 PREDICTED: aryl hydrocarbon receptor nuclear translocator-like isoform 3 M. mulatta 100.0 625
XP_001171687.3 PREDICTED: aryl hydrocarbon receptor nuclear translocator-like isoform 3 P. troglodytes 100.0 625
NP_001169.3 ARNTL gene product H. sapiens 100.0 624
NP_001075390.1 ARNTL gene product E. caballus 99.8 625
NP_031515.1 Arntl gene product M. musculus 99.5 625
XP_851850.2 PREDICTED: aryl hydrocarbon receptor nuclear translocator-like isoform 2 C. lupus familiaris 99.5 625
NP_001178099.1 aryl hydrocarbon receptor nuclear translocator-like protein 1 B. taurus 99.5 625
NP_571652.1 arntl1a gene product D. rerio 93.3 625
NP_001089031.1 uncharacterized protein LOC503673 X. laevis 92.0 626
NP_524168.2 cycle D. melanogaster 60.9 408
NP_001251326.1 Protein AHA-1, isoform b C. elegans 51.0 200
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
NP_077338.2 Arntl gene product R. norvegicus 99.4 625
NP_001090894.1 ARNTL gene product S. scrofa 99.4 625

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; uncharacterized tissue; embryonic tissue; pituitary gland; mouth; lung; skin; blood; cervix; ovary; spleen; pancreas; testis; vascular; esophagus; thymus; kidney; uterus; mixed; connective tissue; intestine; stomach; liver; bone; muscle; trachea; placenta; heart; prostate; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15
UniSTS entry: Chr 11 MARC_12777-12778:999891099:1
UniSTS entry: Chr 11 RH78096 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AF044288.1 Homo sapiens basic-helix-loop-helix-PAS orphan MOP3 (MOP3) mRNA, complete cds PA
NM_001178.4 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like (ARNTL), transcript variant 1, mRNA PA
NM_001030273.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like (ARNTL), transcript variant 3, mRNA PA
NM_001030272.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like (ARNTL), transcript variant 2, mRNA PA
AK291510.1 Homo sapiens cDNA FLJ77694 complete cds, highly similar to Homo sapiens aryl hydrocarbon receptor nuclear translocator-like(ARNTL), mRNA P
AK315174.1 Homo sapiens cDNA, FLJ96151, highly similar to Homo sapiens aryl hydrocarbon receptor nuclear translocator-like(ARNTL), mRNA P
AK095749.1 Homo sapiens cDNA FLJ38430 fis, clone FEBRA2013699, highly similar to Aryl hydrocarbon receptor nucleartranslocator-like protein 1 P
BC031214.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like, mRNA (cDNA clone MGC:39496 IMAGE:4793007), complete cds PA
BC016674.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like, mRNA (cDNA clone MGC:21285 IMAGE:3921870), complete cds PA
AB000816.1 Homo sapiens mRNA for BMAL1d, partial cds P
U60415.1 Human bHLH-PAS protein JAP3 mRNA, complete cds PA
U51627.1 Human MOP3 mRNA, complete cds P
BC041129.1 Homo sapiens aryl hydrocarbon receptor nuclear translocator-like, mRNA (cDNA clone MGC:47515 IMAGE:5753529), complete cds PA
AB000812.1 Homo sapiens mRNA for BMAL1b, complete cds P
AB000814.1 Homo sapiens mRNA for BMAL1f, partial cds PA
AB000815.1 Homo sapiens mRNA for BMAL1e, complete cds P

EST sequences (10 of 213) [Show all sequences]

AA903736.1 Clone IMAGE:1518704 uncharacterized tissue 3' read A
AI074014.1 Clone IMAGE:1670829 uncharacterized tissue 3' read
AI139380.1 Clone IMAGE:1710686 uterus 3' read A
BX100164.1 Clone IMAGp998I06381_;_IMAGE:198989 mixed
BX105921.1 Clone IMAGp998J1574_;_IMAGE:23820 brain A
CB149133.1 Clone L15CKK1-35-D12 liver 5' read P
U69202.1 Clone 37833 brain PA
AI341555.1 Clone IMAGE:1939053 embryonic tissue 3' read A
AI347923.1 Clone IMAGE:1927427 intestine 3' read A
AI351322.1 Clone IMAGE:1931404 mixed 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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