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UGID:2725702     UniGene Hs.656384     Homo sapiens (human)   AGAP4
ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 (AGAP4)

Human protein-coding gene AGAP4. Represented by 41 ESTs from 31 cDNA libraries. Corresponds to reference sequence NM_133446.2. [UniGene 2725702 - Hs.656384]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_597703.2 AGAP4 gene product H. sapiens 100.0 662
NP_001032213.1 Agap1 gene product M. musculus 79.9 553
NP_001084915.1 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 X. laevis 70.0 609
XP_001921526.2 PREDICTED: centaurin, gamma 2-like D. rerio 69.4 605
NP_723850.1 centaurin gamma 1A, isoform C D. melanogaster 52.1 192
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_001141368.3 PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7 isoform 1 P. troglodytes 94.5 420
XP_848466.2 PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 C. lupus familiaris 80.8 552

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; embryonic tissue; intestine; lymph node; brain; uterus; liver; nerve; mixed; kidney; mammary gland; larynx; prostate; eye; testis; lung; blood; umbilical cord; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q11.22
UniSTS entry: Chr 10 RH44360
UniSTS entry: Chr 10 RH40305
UniSTS entry: Chr 10 RH121518
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC048341.1 Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, mRNA (cDNA clone IMAGE:5208319), partial cds PA
BC062366.1 Homo sapiens centaurin, gamma-like family, member 1, mRNA (cDNA clone IMAGE:5811925), partial cds PA
AF411132.1 Homo sapiens MRIP2 (MRIP2) mRNA, complete cds P
NM_133446.2 Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 (AGAP4), mRNA PA
AK096107.1 Homo sapiens cDNA FLJ38788 fis, clone LIVER2002638 P
BC171833.1 Homo sapiens cDNA clone IMAGE:9054487, containing frame-shift errors P

EST sequences (10 of 41) [Show all sequences]

AI469756.1 Clone IMAGE:2157150 intestine 3' read
AI610824.1 Clone IMAGE:2190115 uterus 3' read A
AL045697.1 Clone DKFZp434C016 testis 3' read P
AI826075.1 Clone IMAGE:2413638 brain 3' read PA
AI863491.1 Clone IMAGE:2386268 kidney 3' read A
BX333025.2 Clone CS0DC018YD01 uncharacterized tissue 3' read P
BX372674.1 Clone CS0DC008YA22 uncharacterized tissue 3' read PA
AW089174.1 Clone IMAGE:2590631 brain 3' read A
AW167132.1 Clone IMAGE:2633767 uterus 3' read PA
R62398.1 Clone IMAGE:152494 mammary gland 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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