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UGID:2724282     UniGene Hs.654964     Homo sapiens (human)   C16orf62
Chromosome 16 open reading frame 62 (C16orf62)

Human protein-coding gene C16orf62. Represented by 507 ESTs from 206 cDNA libraries. Corresponds to reference sequence NM_020314.5. [UniGene 2724282 - Hs.654964]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_064710.4 C16orf62 gene product H. sapiens 100.0 1051
XP_510859.4 PREDICTED: UPF0505 protein C16orf62 homolog isoform 4 P. troglodytes 99.7 1033
XP_002802469.1 PREDICTED: UPF0505 protein C16orf62-like M. mulatta 99.7 950
XP_003916666.1 PREDICTED: UPF0505 protein C16orf62-like P. anubis 99.6 717
NP_082091.3 9030624J02Rik gene product M. musculus 96.0 987
NP_001091651.1 zgc:163107 gene product D. rerio 80.0 962
NP_649826.3 CG8202 D. melanogaster 50.0 835
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
NP_001039833.2 UPF0505 protein C16orf62 homolog B. taurus 98.1 962
XP_536952.4 PREDICTED: UPF0505 protein C16orf62 C. lupus familiaris 97.9 970

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; lung; eye; connective tissue; mouth; skin; uncharacterized tissue; mixed; stomach; muscle; placenta; pharynx; mammary gland; embryonic tissue; cervix; thymus; intestine; uterus; kidney; thyroid; bladder; trachea; parathyroid; blood; lymph node; ovary; vascular; liver; prostate; pancreas; nerve; ganglia; bone; heart; adrenal gland; larynx; lymph
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.3
UniSTS entry: Chr 16 SHGC-60588 [Map Viewer]
UniSTS entry: Chr 16 SHGC-53577
UniSTS entry: Chr 1 L17705
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

BC050464.1 Homo sapiens chromosome 16 open reading frame 62, mRNA (cDNA clone MGC:54296 IMAGE:6061139), complete cds PA
BX537867.1 Homo sapiens mRNA; cDNA DKFZp313H1733 (from clone DKFZp313H1733) PA
BC058845.1 Homo sapiens chromosome 16 open reading frame 62, mRNA (cDNA clone MGC:62059 IMAGE:6452778), complete cds PA
AK024693.1 Homo sapiens cDNA: FLJ21040 fis, clone CAE10642 PA
NM_020314.5 Homo sapiens chromosome 16 open reading frame 62 (C16orf62), mRNA PA
AL136744.1 Homo sapiens mRNA; cDNA DKFZp434B0212 (from clone DKFZp434B0212); complete cds PA
BC014900.2 Homo sapiens chromosome 16 open reading frame 62, mRNA (cDNA clone MGC:16824 IMAGE:3909068), complete cds PA
AF461052.2 Homo sapiens esophageal cancer associated protein mRNA, complete cds P
AK290286.1 Homo sapiens cDNA FLJ75626 complete cds, highly similar to Homo sapiens esophageal cancer associated protein, mRNA PA
AK095078.1 Homo sapiens cDNA FLJ37759 fis, clone BRHIP2023888 P
AL833428.1 Homo sapiens mRNA; cDNA DKFZp313M0539 (from clone DKFZp313M0539) PA
AL832159.1 Homo sapiens mRNA; cDNA DKFZp686H1914 (from clone DKFZp686H1914) PA
AK294885.1 Homo sapiens cDNA FLJ56313 complete cds P

EST sequences (10 of 507) [Show all sequences]

AI022855.1 Clone IMAGE:1650617 parathyroid 3' read PA
AI027427.1 Clone IMAGE:1650190 parathyroid 3' read A
BX106624.1 Clone IMAGp998B203284_;_IMAGE:1303219 lymph node P
BX091874.1 Clone IMAGp998A18529_;_IMAGE:245273 mixed A
CB142464.1 Clone L15CKK1-23-H03 liver 5' read P
CB148782.1 Clone L15CKK1-36-H06 liver 5' read P
AA897197.1 Clone IMAGE:1465995 mixed 3' read
AI245377.1 Clone IMAGE:1869829 kidney 3' read A
AI247878.1 Clone IMAGE:1848873 mixed 3' read A
AI290713.1 Clone IMAGE:1881141 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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