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UGID:2724177     UniGene Hs.654859     Homo sapiens (human)   ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3 (ANKS3)

Human protein-coding gene ANKS3. Represented by 129 ESTs from 83 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 2724177 - Hs.654859]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_597707.1 ANKS3 gene product H. sapiens 100.0 655
NP_082577.2 ankyrin repeat and SAM domain-containing protein 3 M. musculus 88.4 654
NP_001084639.1 ankyrin repeat and sterile alpha motif domain containing 3 X. laevis 69.6 634
NP_001108037.1 zgc:172142 gene product D. rerio 67.0 569
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_003314981.1 PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat and SAM domain-containing protein 3 P. troglodytes 98.3 666
XP_003916532.1 PREDICTED: ankyrin repeat and SAM domain-containing protein 3 isoform 1 P. anubis 98.2 655

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; uncharacterized tissue; uterus; prostate; vascular; intestine; mammary gland; testis; muscle; pancreas; esophagus; lung; liver; bladder; thyroid; mixed; trachea; eye; embryonic tissue; stomach; blood; lymph node; skin; ascites; salivary gland; spleen; bone; ovary; cervix; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.3
UniSTS entry: Chr 1 PMC156606P2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC050387.1 Homo sapiens ankyrin repeat and sterile alpha motif domain containing 3, mRNA (cDNA clone MGC:51955 IMAGE:5751728), complete cds PA
AK123496.1 Homo sapiens cDNA FLJ41502 fis, clone BRTHA2007122, weakly similar to ANKYRIN 2 P
AK123371.1 Homo sapiens cDNA FLJ41377 fis, clone BRCAN2008528 P
NM_133450.3 Homo sapiens ankyrin repeat and sterile alpha motif domain containing 3 (ANKS3), transcript variant 1, mRNA PA
AK056907.1 Homo sapiens cDNA FLJ32345 fis, clone PROST2006491 P
AB075857.1 Homo sapiens mRNA for KIAA1977 protein P
AK301683.1 Homo sapiens cDNA FLJ56260 complete cds, highly similar to Ankyrin repeat and SAM domain-containing protein 3 P
BC032314.1 Homo sapiens ankyrin repeat and sterile alpha motif domain containing 3, mRNA (cDNA clone IMAGE:5218952), with apparent retained intron PA
NM_001242929.1 Homo sapiens ankyrin repeat and sterile alpha motif domain containing 3 (ANKS3), transcript variant 2, mRNA PA
NR_040252.1 Homo sapiens ankyrin repeat and sterile alpha motif domain containing 3 (ANKS3), transcript variant 3, non-coding RNA PA

EST sequences (10 of 129) [Show all sequences]

U69199.1 Clone 25351 brain PA
R39842.1 Clone IMAGE:25351 brain 3' read A
T08872.1 Clone HIBBL45 brain 5' read P
AI560632.1 Clone IMAGE:2213202 uterus 3' read A
R56126.1 Clone IMAGE:41082 brain 3' read A
R56520.1 Clone IMAGE:41082 brain 5' read
AL036502.1 Clone DKFZp564G1562 brain 5' read
BX282418.1 Clone IMAGp998H1411497_;_IMAGE:5198653 brain P
BX333649.2 Clone CS0DC028YF08 uncharacterized tissue 3' read
BX333650.2 Clone CS0DC028YF08 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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