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UGID:2724154     UniGene Hs.654836     Homo sapiens (human)   TSPAN4
Tetraspanin 4 (TSPAN4)

Human protein-coding gene TSPAN4. Represented by 497 ESTs from 218 cDNA libraries. Corresponds to 7 reference sequences (different isoforms). [UniGene 2724154 - Hs.654836]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001150090.1 PREDICTED: tetraspanin-4 isoform 4 P. troglodytes 100.0 237
NP_003262.1 TSPAN4 gene product H. sapiens 100.0 237
XP_003909408.1 PREDICTED: tetraspanin-4 P. anubis 99.7 329
NP_444312.1 Tspan4 gene product M. musculus 98.7 237
NP_001002348.1 zgc:92174 gene product D. rerio 74.5 238
NP_001085727.1 MGC80611 protein X. laevis 65.4 234
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_003749066.1 PREDICTED: tetraspanin-4-like isoform 1 R. norvegicus 98.3 237
XP_001494742.1 PREDICTED: tetraspanin-4-like E. caballus 96.6 237

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; mixed; lymph node; mammary gland; skin; eye; pancreas; uncharacterized tissue; nerve; adipose tissue; placenta; embryonic tissue; salivary gland; umbilical cord; thymus; kidney; uterus; heart; intestine; muscle; blood; ascites; prostate; bone; testis; bone marrow; liver; ovary; cervix; connective tissue; esophagus; stomach; lymph; spleen; ganglia; thyroid; trachea
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.5
UniSTS entry: Chr 11 STS-W47645 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

BT006776.1 Homo sapiens transmembrane 4 superfamily member 7 mRNA, complete cds P
AK126635.1 Homo sapiens cDNA FLJ44677 fis, clone BRACE3009265
AK126456.1 Homo sapiens cDNA FLJ44492 fis, clone UTERU2035331 P
NM_003271.4 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 5, mRNA PA
CR457108.1 Homo sapiens full open reading frame cDNA clone RZPDo834E077D for gene TM4SF7, transmembrane 4 superfamily member 7; complete cds, incl. stopcodon P
BC093031.1 Homo sapiens tetraspanin 4, mRNA (cDNA clone MGC:110935 IMAGE:30334510), complete cds PA
NM_001025239.1 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 7, mRNA PA
NM_001025238.1 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 6, mRNA PA
NM_001025237.1 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 1, mRNA PA
NM_001025236.1 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 4, mRNA PA
NM_001025235.1 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 3, mRNA PA
NM_001025234.1 Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 2, mRNA PA
BC000389.2 Homo sapiens tetraspanin 4, mRNA (cDNA clone MGC:8437 IMAGE:2821236), complete cds PA
BC019314.2 Homo sapiens tetraspanin 4, mRNA (cDNA clone MGC:4337 IMAGE:2821236), complete cds PA
AK291089.1 Homo sapiens cDNA FLJ76179 complete cds, highly similar to Homo sapiens transmembrane 4 superfamily member 7 (TM4SF7), mRNA P
AF022813.1 Homo sapiens tetraspan (NAG-2) mRNA, complete cds PA
AF054841.1 Homo sapiens tetraspan TM4SF (TSPAN-4) mRNA, complete cds P

EST sequences (10 of 497) [Show all sequences]

AA974893.1 Clone IMAGE:1588772 kidney 3' read A
AA991391.1 Clone IMAGE:1608939 mammary gland 3' read A
AA834072.1 Clone IMAGE:1422216 kidney
AA922520.1 Clone IMAGE:1551929 uncharacterized tissue 3' read A
AI094418.1 Clone IMAGE:1670443 brain 3' read A
AI131198.1 Clone IMAGE:1709317 heart 3' read A
AI138261.1 Clone IMAGE:1735462 testis 3' read A
AI140944.1 Clone IMAGE:1693401 heart 3' read A
AI143844.1 Clone IMAGE:1708710 heart 3' read A
CB052769.1 Clone IMAGE:3290381 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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