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UGID:2559228     UniGene Hs.652255     Homo sapiens (human)   RRP8
Ribosomal RNA processing 8, methyltransferase, homolog (yeast) (RRP8)

Human protein-coding gene RRP8. Represented by 256 ESTs from 126 cDNA libraries. Corresponds to reference sequence NM_015324.3. [UniGene 2559228 - Hs.652255]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056139.1 RRP8 gene product H. sapiens 100.0 455
XP_508260.3 PREDICTED: ribosomal RNA-processing protein 8 P. troglodytes 99.8 455
NP_080173.1 Rrp8 gene product M. musculus 86.4 456
XP_001334686.1 PREDICTED: hypothetical protein LOC797198 D. rerio 60.0 269
XP_001700870.1 hypothetical protein CHLREDRAFT_98284 C. reinhardtii 52.5 158
NP_198869.2 ribosomal RNA-processing protein 8 A. thaliana 51.8 219
NP_499920.1 Protein T07A9.8 C. elegans 45.9 194
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
XP_001100895.2 PREDICTED: ribosomal RNA-processing protein 8-like M. mulatta 96.5 455
XP_003910332.1 PREDICTED: ribosomal RNA-processing protein 8 P. anubis 96.3 455

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; uncharacterized tissue; placenta; lung; kidney; brain; uterus; ovary; intestine; blood; embryonic tissue; pharynx; mammary gland; larynx; tonsil; mixed; testis; prostate; cervix; pancreas; thyroid; spleen; liver; eye; lymph node; muscle; stomach; lymph; ascites; connective tissue; bone; adrenal gland; esophagus; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.4
UniSTS entry: Chr 11 WI-12713 [Map Viewer]
UniSTS entry: Chr 11 A007B37 [Map Viewer]
UniSTS entry: Chr 11 RH47197
UniSTS entry: Chr 11 WI-15843 [Map Viewer]
UniSTS entry: Chr 11 G59726
UniSTS entry: Chr 11 WI-11689 [Map Viewer]
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 11 D11S4708
UniSTS entry: Chr 11 G65604
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC001071.2 Homo sapiens ribosomal RNA processing 8, methyltransferase, homolog (yeast), mRNA (cDNA clone MGC:2638 IMAGE:3505288), complete cds PA
NM_015324.3 Homo sapiens ribosomal RNA processing 8, methyltransferase, homolog (yeast) (RRP8), mRNA PA
D87060.1 Homo sapiens hucep-1 mRNA for cerebral protein-1, complete cds P
AK091817.1 Homo sapiens cDNA FLJ34498 fis, clone HLUNG2005203
AB007869.1 Homo sapiens KIAA0409 mRNA, partial cds P

EST sequences (10 of 256) [Show all sequences]

AI022004.1 Clone IMAGE:1655395 mixed 3' read P
AI024386.1 Clone IMAGE:1640905 testis 3' read A
AI038998.1 Clone IMAGE:1657291 embryonic tissue 3' read P
CB047634.1 Clone IMAGE:3253173 kidney 5' read
BX104526.1 Clone IMAGp998M191747_;_IMAGE:713274 lymph node
BX089762.1 Clone IMAGp998I024163_;_IMAGE:1640905 testis P
AI197935.1 Clone IMAGE:1943671 prostate 3' read A
AI202687.1 Clone IMAGE:1944400 prostate 3' read A
AI282161.1 Clone IMAGE:1876007 mixed 3' read PA
AI356016.1 Clone IMAGE:2016767 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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