NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:2478829     UniGene Hs.648205     Homo sapiens (human)   C12orf40
Chromosome 12 open reading frame 40 (C12orf40)

Human protein-coding gene C12orf40. Represented by 13 ESTs from 7 cDNA libraries. EST representation biased toward normal. Corresponds to reference sequence NM_001031748.2. [UniGene 2478829 - Hs.648205]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001026918.2 C12orf40 gene product H. sapiens 100.0 651
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_001151762.2 PREDICTED: uncharacterized protein C12orf40-like P. troglodytes 98.3 651
XP_001088224.1 PREDICTED: uncharacterized protein C12orf40-like, partial M. mulatta 92.4 643

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: normal [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; muscle
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q12
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC048120.1 Homo sapiens chromosome 12 open reading frame 40, mRNA (cDNA clone MGC:57397 IMAGE:5266211), complete cds PA
NM_001031748.2 Homo sapiens chromosome 12 open reading frame 40 (C12orf40), mRNA PA
BC038754.1 Homo sapiens chromosome 12 open reading frame 40, mRNA (cDNA clone MGC:43595 IMAGE:5269851), complete cds PA

EST sequences (13)

AW183224.1 Clone IMAGE:2662927 mixed 3' read A
AW183302.1 Clone IMAGE:2663069 mixed 3' read
AW628770.1 Clone IMAGE:2974670 mixed 3' read A
AW661998.1 Clone IMAGE:2978564 mixed 3' read
BE972784.1 Clone IMAGE:3935427 testis 5' read
DB028210.1 Clone TESTI2011028 testis 5' read P
DB446576.1 Clone H013026D23 testis 5' read P
BG772324.1 Clone IMAGE:4839127 testis 5' read P
EL734018.1 mixed 5' read P
BG724290.1 Clone IMAGE:4830079 testis 5' read
BI459303.1 Clone IMAGE:5266211 testis 5' read P
BI461967.1 Clone IMAGE:5269851 testis 5' read P
AL705293.1 Clone DKFZp686F2435 muscle 5' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help