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UGID:2360792     UniGene Hs.645009     Homo sapiens (human)   CNOT7
CCR4-NOT transcription complex, subunit 7 (CNOT7)

Human protein-coding gene CNOT7. Represented by 576 ESTs from 245 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2360792 - Hs.645009]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001258471.1 CCR4-NOT transcription complex subunit 7 isoform 1 M. musculus 100.0 284
NP_001100783.1 Cnot7 gene product R. norvegicus 100.0 284
XP_001364122.1 PREDICTED: CCR4-NOT transcription complex subunit 7-like M. domestica 100.0 284
XP_003221616.1 PREDICTED: CCR4-NOT transcription complex subunit 7-like A. carolinensis 100.0 284
XP_002194151.1 PREDICTED: CCR4-NOT transcription complex subunit 7 T. guttata 100.0 284
NP_001006454.1 CNOT7 gene product G. gallus 100.0 284
XP_003205828.1 PREDICTED: CCR4-NOT transcription complex subunit 7-like M. gallopavo 100.0 284
XP_001508901.1 PREDICTED: CCR4-NOT transcription complex subunit 7-like O. anatinus 100.0 284
XP_001095485.1 PREDICTED: CCR4-NOT transcription complex subunit 7 isoform 4 M. mulatta 100.0 284
XP_003902512.1 PREDICTED: CCR4-NOT transcription complex subunit 7 P. anubis 100.0 284
XP_001141414.1 PREDICTED: CCR4-NOT transcription complex subunit 7 isoform 2 P. troglodytes 100.0 284
NP_037486.2 CNOT7 gene product H. sapiens 100.0 284
XP_540010.2 PREDICTED: CCR4-NOT transcription complex subunit 7 isoform 1 C. lupus familiaris 100.0 284
XP_001488503.1 PREDICTED: CCR4-NOT transcription complex subunit 7-like isoform 2 E. caballus 100.0 284
XP_001924495.3 PREDICTED: CCR4-NOT transcription complex subunit 7 isoform 1 S. scrofa 100.0 284
NP_001029484.1 CNOT7 gene product B. taurus 100.0 284
XP_004021782.1 PREDICTED: CCR4-NOT transcription complex subunit 7 O. aries 100.0 284
XP_002709558.1 PREDICTED: CCR4-NOT transcription complex, subunit 7-like O. cuniculus 100.0 284
NP_001089689.1 CCR4-NOT transcription complex subunit 7 X. laevis 98.6 284
NP_001070723.1 cnot7 gene product D. rerio 98.2 284
NP_729775.1 Pop2, isoform B D. melanogaster 77.1 280
NP_178193.1 putative CCR4-associated factor 1-6 A. thaliana 60.1 266
XP_001697447.1 CCR4-associated factor C. reinhardtii 59.4 276
NP_499553.1 Protein CCF-1 C. elegans 51.3 263
XP_959029.1 CCR4-NOT transcription complex subunit 7 N. crassa 50.0 296
NP_014450.3 Pop2p S. cerevisiae 48.1 216
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
NP_001096375.1 cnot7 gene product X. tropicalis 98.2 284
XP_003455861.1 PREDICTED: CCR4-NOT transcription complex subunit 7-like O. niloticus 96.8 284

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; connective tissue; embryonic tissue; lung; bladder; liver; uterus; uncharacterized tissue; pancreas; placenta; eye; muscle; lymph; intestine; prostate; mouth; trachea; thymus; skin; pharynx; ovary; mammary gland; kidney; lymph node; vascular; blood; bone marrow; bone; thyroid; stomach; heart; umbilical cord; ascites; salivary gland; spleen; cervix; nerve; pineal gland; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8p22-p21.3
UniSTS entry: Chr 1 RH80037
UniSTS entry: Chr 1 D8S2081
UniSTS entry: Chr 8 D8S1343E [Map Viewer]
UniSTS entry: CNOT7
UniSTS entry: Chr 8 PMC310830P26
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BT006685.1 Homo sapiens CCR4-NOT transcription complex, subunit 7 mRNA, complete cds P
AF086915.1 Homo sapiens CAF1 mRNA, complete cds P
BC060852.1 Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA clone MGC:71771 IMAGE:5273703), complete cds PA
AK001209.1 Homo sapiens cDNA FLJ10347 fis, clone NT2RM2001035, highly similar to CCR4-NOT transcription complex subunit 7 P
BC070187.1 Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA clone MGC:88168 IMAGE:4738218), complete cds PA
NM_013354.5 Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 1, mRNA P
L46722.1 Homo sapiens BTG1 binding factor 1 (CAF1) mRNA, complete cds P
AK021808.1 Homo sapiens cDNA FLJ11746 fis, clone HEMBA1005528, highly similar to CCR4-NOT transcription complex subunit 7 P
AK023466.1 Homo sapiens cDNA FLJ13404 fis, clone PLACE1001602, highly similar to CCR4-NOT transcription complex subunit 7 P
AK023561.1 Homo sapiens cDNA FLJ13499 fis, clone PLACE1004681
AK225893.1 Homo sapiens mRNA for CCR4-NOT transcription complex subunit 7 variant, clone: FCC120H08 PA
BC007315.2 Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA clone MGC:1092 IMAGE:2989585), complete cds PA
NM_054026.2 Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 2, mRNA P
AL833642.1 Homo sapiens mRNA; cDNA DKFZp686O1079 (from clone DKFZp686O1079) PA

EST sequences (10 of 576) [Show all sequences]

AA921721.1 Clone IMAGE:1457190 intestine 3' read A
AA903598.1 Clone IMAGE:1517533 uncharacterized tissue 3' read
AA970654.1 Clone IMAGE:1574517 kidney 3' read A
AI080471.1 Clone IMAGE:1610794 uncharacterized tissue 3' read P
AI081981.1 Clone IMAGE:1637997 mammary gland 3' read
AI095380.1 Clone IMAGE:1666545 skin 3' read A
AI123775.1 Clone IMAGE:1567179 mixed 3' read A
AI214917.1 Clone IMAGE:1883412 lung 3' read P
R27368.1 Clone IMAGE:133483 placenta 5' read P
R27369.1 Clone IMAGE:133483 placenta 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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