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UGID:2143093     UniGene Hs.636199     Homo sapiens (human)   LOC389906
Zinc finger protein 839 pseudogene (LOC389906)

Human pseudo gene LOC389906. Represented by 100 ESTs from 68 cDNA libraries. Corresponds to reference sequence NR_034031.1. [UniGene 2143093 - Hs.636199]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001715829.3 PREDICTED: uncharacterized protein LOC729162 H. sapiens 99.4 314
NP_001186714.1 zinc finger protein 839 isoform 2 M. musculus 48.9 278
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_001137962.3 PREDICTED: uncharacterized protein LOC740134, partial P. troglodytes 95.5 244
XP_003902345.1 PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 839 P. anubis 75.1 394

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; intestine; blood; mixed; pancreas; uterus; ovary; testis; thyroid; prostate; skin; eye; lung; bone marrow; mammary gland; placenta; pharynx; heart; parathyroid; connective tissue; liver; lymph node; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp22.33
UniSTS entry: Chr X RH102612
UniSTS entry: Chr X DXS6726
UniSTS entry: Chr X DXS1145
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK125688.1 Homo sapiens cDNA FLJ43700 fis, clone TCOLN2000641
BC030635.1 Homo sapiens, clone IMAGE:4108565, mRNA, partial cds
BC031508.2 Homo sapiens similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1), mRNA (cDNA clone IMAGE:4510900) A
BC035462.2 Homo sapiens similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1), mRNA (cDNA clone IMAGE:4515337) A
BC017231.2 Homo sapiens similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1), mRNA (cDNA clone IMAGE:4124593), partial cds PA
BC017239.2 Homo sapiens cDNA clone IMAGE:3938771, partial cds PA
NR_034031.1 Homo sapiens zinc finger protein 839 pseudogene (LOC389906), non-coding RNA PA
BC038894.1 Homo sapiens, clone IMAGE:4431497, mRNA A

EST sequences (10 of 100) [Show all sequences]

AA862823.1 Clone IMAGE:1469744 uncharacterized tissue 3' read A
AI167836.1 Clone IMAGE:1682637 parathyroid 3' read
AI262310.1 Clone IMAGE:1870833 intestine 3' read A
AI262470.1 Clone IMAGE:1871513 intestine 3' read A
AI264586.1 Clone IMAGE:1874823 intestine 3' read A
AI310346.1 Clone IMAGE:1913502 intestine 3' read A
AI336612.1 Clone IMAGE:1913096 intestine 3' read A
AI369232.1 Clone IMAGE:2017867 brain 3' read A
AI432503.1 Clone IMAGE:2120323 pancreas 3' read A
AI687939.1 Clone IMAGE:2207429 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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