NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:2142102     UniGene Hs.635208     Homo sapiens (human)   TMED11P
Transmembrane emp24 protein transport domain containing 11, pseudogene (TMED11P)

Human pseudo gene TMED11P. Represented by 5 ESTs from 4 cDNA libraries. Corresponds to reference sequence NR_033768.1. [UniGene 2142102 - Hs.635208]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_517060.3 PREDICTED: glycoprotein 25L-like P. troglodytes 99.3 154
NP_080385.2 Tmed11 gene product M. musculus 87.7 154
NP_001088091.1 transmembrane emp24 protein transport domain containing 9 X. laevis 58.9 140
NP_001002134.1 tmed4 gene product D. rerio 58.7 154
NP_059980.2 TMED9 gene product H. sapiens 58.7 154
NP_788616.1 eclair D. melanogaster 53.6 152
NP_507861.1 Protein Y60A3A.9 C. elegans 52.3 152
Other hits (2 of 40) [Show all]SpeciesId(%)Len(aa)
XP_003890968.1 PREDICTED: glycoprotein 25L-like P. anubis 94.9 97
XP_003364798.1 PREDICTED: transmembrane emp24 domain-containing protein 11-like E. caballus 91.6 154

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; mixed; connective tissue; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p16.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NR_033768.1 Homo sapiens transmembrane emp24 protein transport domain containing 11, pseudogene (TMED11P), non-coding RNA PA

EST sequences (5)

AA887029.1 Clone IMAGE:1291189 bone
BX485354.1 Clone DKFZp686N16246 muscle 5' read
DY654917.1 Clone ucsc5_1.2.1.L1.1.D06 mixed
BG190838.1 connective tissue PA
BG215779.1 connective tissue PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help