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UGID:2139585     UniGene Hs.632691     Homo sapiens (human)   C9orf43
Chromosome 9 open reading frame 43 (C9orf43)

Human protein-coding gene C9orf43. Represented by 81 ESTs from 15 cDNA libraries. EST representation biased toward testis. Corresponds to reference sequence NM_152786.1. [UniGene 2139585 - Hs.632691]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_689999.1 C9orf43 gene product H. sapiens 100.0 460
NP_808275.1 uncharacterized protein LOC214106 M. musculus 48.7 230
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_003312289.1 PREDICTED: uncharacterized protein C9orf43 homolog P. troglodytes 98.8 480
XP_003911396.1 PREDICTED: uncharacterized protein C9orf43 homolog P. anubis 91.8 513

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; brain; uterus; embryonic tissue; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q32
UniSTS entry: Chr 9 RH18148
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK313867.1 Homo sapiens cDNA, FLJ94500 P
BC026884.1 Homo sapiens chromosome 9 open reading frame 43, mRNA (cDNA clone MGC:17358 IMAGE:3455891), complete cds PA
BC033037.2 Homo sapiens chromosome 9 open reading frame 43, mRNA (cDNA clone MGC:33654 IMAGE:4827930), complete cds PA
AK301872.1 Homo sapiens cDNA FLJ56263 complete cds PA
NM_152786.1 Homo sapiens chromosome 9 open reading frame 43 (C9orf43), mRNA PA

EST sequences (10 of 81) [Show all sequences]

AF012393.1 Clone TDP3.12b testis P
AI693523.1 Clone IMAGE:2330924 mixed 3' read PA
BX280246.1 Clone IMAGp998F0712208_;_IMAGE:5529606 uterus P
CD243798.1 Clone IMAGE:30378009 testis 5' read P
CD358591.1 Clone IMAGE:30389428 testis 5' read P
BU101506.1 mixed P
BU101507.1 mixed P
BU102126.1 mixed P
CV024527.1 mixed 5' read P
BP368893.1 Clone TST00483 testis 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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