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UGID:2096425     UniGene Hs.627414     Homo sapiens (human)   RPS18
Ribosomal protein S18 (RPS18)

Human protein-coding gene RPS18. Represented by 2450 ESTs from 393 cDNA libraries. Corresponds to reference sequence NM_022551.2. [UniGene 2096425 - Hs.627414]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_035426.1 Rps18 gene product M. musculus 100.0 151
XP_002724624.1 PREDICTED: 40S ribosomal protein S18-like R. norvegicus 100.0 151
NP_001232160.1 putative ribosomal protein S18 T. guttata 100.0 151
NP_001187081.1 40S ribosomal protein S18 I. punctatus 100.0 151
XP_001099137.1 PREDICTED: 40S ribosomal protein S18-like isoform 2 M. mulatta 100.0 151
XP_003897490.1 PREDICTED: 40S ribosomal protein S18 P. anubis 100.0 151
NP_072045.1 RPS18 gene product H. sapiens 100.0 151
NP_001041547.1 RPS18 gene product C. lupus familiaris 100.0 151
XP_001497114.1 PREDICTED: 40S ribosomal protein S18-like E. caballus 100.0 151
NP_999105.1 RPS18 gene product S. scrofa 100.0 151
NP_001028786.1 RPS18 gene product B. taurus 100.0 151
XP_004018794.1 PREDICTED: 40S ribosomal protein S18 O. aries 100.0 151
XP_002714578.1 PREDICTED: ribosomal protein S18-like O. cuniculus 100.0 151
NP_775341.1 rps18 gene product D. rerio 98.7 151
NP_001084747.1 ribosomal protein S18 X. laevis 98.0 151
XP_956794.2 40S ribosomal protein S18 N. crassa 82.5 154
NP_173692.1 40S ribosomal protein S18 A. thaliana 81.6 151
NP_502794.1 Protein RPS-18 C. elegans 80.5 153
NP_476964.1 ribosomal protein S18, isoform A D. melanogaster 79.0 151
NP_010738.1 ribosomal 40S subunit protein S18A S. cerevisiae 74.0 145
XP_001696472.1 ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 70.9 150
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_003969247.1 PREDICTED: 40S ribosomal protein S18-like T. rubripes 99.3 151
XP_004073779.1 PREDICTED: 40S ribosomal protein S18-like O. latipes 99.3 151

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; blood; skin; lung; eye; uncharacterized tissue; prostate; pancreas; mixed; muscle; bone; mammary gland; placenta; lymph; uterus; ovary; liver; bone marrow; heart; stomach; intestine; tonsil; testis; umbilical cord; ascites; adrenal gland; kidney; lymph node; cervix; adipose tissue; pituitary gland; vascular; connective tissue; spleen; mouth; pharynx; thyroid; parathyroid; salivary gland; bladder; pineal gland; thymus; ear; esophagus; ganglia; epididymis
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
UniSTS entry: Chr 3 RH64826
UniSTS entry: Chr 3 D6S1905 [Map Viewer]
UniSTS entry: Chr 3 WI-15797 [Map Viewer]
UniSTS entry: Chr 3 stSG602121
UniSTS entry: Chr 6 RH77
UniSTS entry: Chr 17 WI-17645 [Map Viewer]
UniSTS entry: Chr 8 STS-U89942 [Map Viewer]
UniSTS entry: Chr 2 RH99049
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

X69150.1 Homo sapiens mRNA for ribosomal protein S18 PA
AY536376.1 Homo sapiens rhabdomyosarcoma antigen MU-RMS-40.21 (RPS18) mRNA, complete cds, alternatively spliced P
BC101788.1 Homo sapiens ribosomal protein S18, mRNA (cDNA clone MGC:126837 IMAGE:8069294), complete cds P
BC101786.1 Homo sapiens ribosomal protein S18, mRNA (cDNA clone MGC:126835 IMAGE:8069292), complete cds P
BC106063.1 Homo sapiens ribosomal protein S18, mRNA (cDNA clone MGC:117351 IMAGE:4386992), complete cds PA
NM_022551.2 Homo sapiens ribosomal protein S18 (RPS18), mRNA PA

EST sequences (10 of 2450) [Show all sequences]

AA973901.1 Clone IMAGE:1569372 lung 3' read P
AA976612.1 Clone IMAGE:1585261 lung 3' read P
R14848.1 Clone IMAGE:129481 mixed 3' read
AA987406.1 Clone IMAGE:1593371 kidney 3' read
AI000227.1 Clone IMAGE:1613833 uncharacterized tissue 3' read PA
AI005561.1 Clone IMAGE:1641516 testis 3' read A
AI024296.1 Clone IMAGE:1641477 testis 3' read
AI081281.1 Clone IMAGE:1637513 uncharacterized tissue 3' read PA
AI093627.1 Clone IMAGE:1634408 mixed 3' read A
AI125066.1 Clone IMAGE:1726306 vascular 3' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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