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UGID:2070217     UniGene Hs.601206     Homo sapiens (human)   ANKRD17
Ankyrin repeat domain 17 (ANKRD17)

Human protein-coding gene ANKRD17. Represented by 629 ESTs from 284 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2070217 - Hs.601206]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001157805.2 PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 17 isoform 6 P. troglodytes 100.0 2602
NP_115593.3 ANKRD17 gene product H. sapiens 100.0 2602
XP_003898828.1 PREDICTED: ankyrin repeat domain-containing protein 17 isoform 1 P. anubis 100.0 2602
XP_002804137.1 PREDICTED: ankyrin repeat domain-containing protein 17-like M. mulatta 99.9 2516
XP_001489724.2 PREDICTED: ankyrin repeat domain-containing protein 17 E. caballus 99.7 2589
XP_851124.2 PREDICTED: ankyrin repeat domain-containing protein 17 isoform 3 C. lupus familiaris 99.7 2593
XP_004009951.1 PREDICTED: ankyrin repeat domain-containing protein 17 O. aries 99.7 2489
NP_001179110.1 ankyrin repeat domain-containing protein 17 B. taurus 99.7 2614
NP_001188312.1 ANKRD17 gene product S. scrofa 99.6 2362
XP_002717073.1 PREDICTED: ankyrin repeat domain protein 17-like O. cuniculus 99.5 2454
NP_112148.2 Ankrd17 gene product M. musculus 98.8 2602
NP_001186697.1 ankyrin repeat and KH domain-containing protein 1 D. rerio 80.7 2557
NP_788733.1 multiple ankyrin repeats single KH domain, isoform A D. melanogaster 74.2 2295
NP_001122794.1 Protein R11A8.7, isoform c C. elegans 64.0 680
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
NP_001099469.1 ankyrin repeat domain-containing protein 17 R. norvegicus 98.2 2357
XP_003205724.1 PREDICTED: ankyrin repeat domain-containing protein 17-like M. gallopavo 97.2 2478

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; embryonic tissue; lung; mouth; thymus; liver; skin; mixed; heart; testis; kidney; uncharacterized tissue; uterus; lymph node; placenta; muscle; bladder; eye; intestine; larynx; thyroid; blood; prostate; pancreas; pharynx; connective tissue; vascular; stomach; ovary; pituitary gland; lymph; trachea; epididymis; ear; ascites; bone marrow; cervix; adipose tissue; parathyroid; bone; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q13.3
UniSTS entry: Chr 4 SGC33720 [Map Viewer]
UniSTS entry: Chr 4 RH127459
UniSTS entry: Chr 4 G34499
UniSTS entry: Chr 4 RH35831 [Map Viewer]
UniSTS entry: Chr 4 SHGC-24827 [Map Viewer]
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D1S3694
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AB014597.2 Homo sapiens mRNA for KIAA0697 protein, partial cds P
BC043394.1 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:5532386), complete cds PA
BX648035.1 Homo sapiens mRNA; cDNA DKFZp686P0286 (from clone DKFZp686P0286) PA
NM_198889.1 Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 2, mRNA PA
AF308285.1 Homo sapiens serologically defined breast cancer antigen NY-BR-16 mRNA, complete cds P
BC007747.2 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:4098694), partial cds PA
AK055209.1 Homo sapiens cDNA FLJ30647 fis, clone CTONG2005553, weakly similar to ANKYRIN 2 P
AK307581.1 Homo sapiens cDNA, FLJ97529 P
AK096518.1 Homo sapiens cDNA FLJ39199 fis, clone OCBBF2005189, highly similar to Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 2, mRNA P
AL833287.1 Homo sapiens mRNA; cDNA DKFZp451C149 (from clone DKFZp451C149) PA
AK300302.1 Homo sapiens cDNA FLJ57343 partial cds, highly similar to Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 1, mRNA P
AK299046.1 Homo sapiens cDNA FLJ58273 complete cds, highly similar to Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 1, mRNA P
BC019963.2 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:4342843), partial cds PA
AL831903.1 Homo sapiens mRNA; cDNA DKFZp547D039 (from clone DKFZp547D039) PA
BC029935.2 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:4753384) PA
BC009043.1 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:3446462), with apparent retained intron PA
BC004173.2 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:2907081), partial cds PA
BC004891.2 Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone IMAGE:3938840) PA
AK025859.1 Homo sapiens cDNA: FLJ22206 fis, clone HRC01431 PA
NM_032217.3 Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 1, mRNA PA

EST sequences (10 of 629) [Show all sequences]

R19252.1 Clone IMAGE:33346 brain 5' read P
AI041921.1 Clone IMAGE:1664602 skin 3' read
AI075180.1 Clone IMAGE:1673645 mixed 3' read P
AI079656.1 Clone IMAGE:1668469 parathyroid 3' read A
BX110720.1 Clone IMAGp998P205707_;_IMAGE:2303491 uncharacterized tissue P
BX110637.1 Clone IMAGp998P02155_;_IMAGE:33346 brain A
BX117402.1 Clone IMAGp998A07400_;_IMAGE:206094 mixed
AI207863.1 Clone IMAGE:1684804 brain 3' read P
AI216491.1 Clone IMAGE:1844133 mixed 3' read
CB163761.1 Clone L17N670205n1-46-D01 liver 5' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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