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UGID:138629     UniGene Hs.59486     Homo sapiens (human)   HSDL2
Hydroxysteroid dehydrogenase like 2 (HSDL2)

Human protein-coding gene HSDL2. Represented by 414 ESTs from 202 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 138629 - Hs.59486]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001186006.1 HSDL2 gene product P. troglodytes 100.0 417
NP_115679.2 HSDL2 gene product H. sapiens 100.0 417
NP_077217.2 Hsdl2 gene product M. musculus 88.2 489
NP_001083285.1 hydroxysteroid dehydrogenase-like protein 2 X. laevis 82.0 416
NP_955893.1 hsdl2 gene product D. rerio 78.3 414
NP_651578.1 CG5590 D. melanogaster 70.0 409
NP_001021972.1 Protein DHS-6 C. elegans 67.3 410
Other hits (2 of 41) [Show all]SpeciesId(%)Len(aa)
XP_001104189.1 PREDICTED: hydroxysteroid dehydrogenase like 2 isoform 4 M. mulatta 97.6 417
XP_003911406.1 PREDICTED: hydroxysteroid dehydrogenase-like protein 2 isoform 1 P. anubis 97.6 417

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; kidney; uncharacterized tissue; lung; intestine; testis; skin; adipose tissue; muscle; heart; liver; placenta; pharynx; prostate; spinal cord; connective tissue; pineal gland; spleen; pituitary gland; bone marrow; thyroid; mouth; parathyroid; thymus; lymph; eye; adrenal gland; trachea; ovary; stomach; pancreas; uterus; blood; embryonic tissue; lymph node; mammary gland; vascular; nerve; bone; bladder; ascites; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q32
UniSTS entry: Chr 9 D9S2084 [Map Viewer]
UniSTS entry: Chr 9 A004Y48 [Map Viewer]
UniSTS entry: Chr 9 D9S996E
UniSTS entry: Chr 9 WI-22620 [Map Viewer]
UniSTS entry: Chr 9 D9S930 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

AL050130.1 Homo sapiens mRNA; cDNA DKFZp586H051 (from clone DKFZp586H051) A
AY093428.1 Homo sapiens hydroxysteroid dehydrogenase-like protein mRNA, complete cds P
BC095451.1 Homo sapiens hydroxysteroid dehydrogenase like 2, mRNA (cDNA clone MGC:111215 IMAGE:30405073), complete cds PA
AK023959.1 Homo sapiens cDNA FLJ13897 fis, clone THYRO1001706
AK225946.1 Homo sapiens mRNA for hydroxysteroid dehydrogenase like 2 variant, clone: FCC115E12 P
BC004331.1 Homo sapiens hydroxysteroid dehydrogenase like 2, mRNA (cDNA clone MGC:10940 IMAGE:3630835), complete cds PA
NM_032303.4 Homo sapiens hydroxysteroid dehydrogenase like 2 (HSDL2), transcript variant 1, mRNA P
AK289929.1 Homo sapiens cDNA FLJ77669 complete cds P
AK292486.1 Homo sapiens cDNA FLJ78710 complete cds, highly similar to Homo sapiens hydroxysteroid dehydrogenase like 2, mRNA P
AK313605.1 Homo sapiens cDNA, FLJ94174 P
AK098721.1 Homo sapiens cDNA FLJ25855 fis, clone TST09510 P
AK090940.1 Homo sapiens cDNA FLJ33621 fis, clone BRAMY2021276 P
AL833735.1 Homo sapiens mRNA; cDNA DKFZp666L095 (from clone DKFZp666L095) PA
NM_001195822.1 Homo sapiens hydroxysteroid dehydrogenase like 2 (HSDL2), transcript variant 2, mRNA P
NR_036651.1 Homo sapiens hydroxysteroid dehydrogenase like 2 (HSDL2), transcript variant 3, non-coding RNA PA

EST sequences (10 of 414) [Show all sequences]

AA988068.1 Clone IMAGE:1603850 lung 3' read A
AA999844.1 Clone IMAGE:1636353 kidney 3' read A
R17355.1 Clone IMAGE:32204 brain 5' read
R18161.1 Clone IMAGE:30527 brain 5' read
AI025401.1 Clone IMAGE:1647318 parathyroid 3' read A
AI076025.1 Clone IMAGE:1670202 brain 3' read A
AI077381.1 Clone IMAGE:1672864 mixed 3' read A
AI080246.1 Clone IMAGE:1678503 mixed 3' read A
AI090791.1 Clone IMAGE:1691673 heart 3' read A
AI094022.1 Clone IMAGE:1688076 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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