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UGID:2061183     UniGene Hs.592172     Homo sapiens (human)   HOXA13
Homeobox A13 (HOXA13)

Human protein-coding gene HOXA13. Represented by 15 ESTs from 12 cDNA libraries. Corresponds to reference sequence NM_000522.4. [UniGene 2061183 - Hs.592172]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000513.2 HOXA13 gene product H. sapiens 100.0 387
XP_527701.3 PREDICTED: homeobox protein Hox-A13 P. troglodytes 99.7 387
NP_001162372.1 homeobox protein Hox-A13 P. anubis 99.5 205
NP_032290.1 Hoxa13 gene product M. musculus 98.7 385
NP_001079321.1 homeobox A13 X. laevis 58.3 294
NP_001078963.1 hoxa13a gene product D. rerio 53.5 309
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
NP_001182271.1 HOXA13 gene product S. scrofa 98.9 186
XP_539492.4 PREDICTED: homeobox protein Hox-A13 C. lupus familiaris 98.7 388

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: prostate; mixed; placenta; eye; adrenal gland; bladder; intestine; uncharacterized tissue; pancreas; testis; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7p15.2
UniSTS entry: Chr 7 REN100761
UniSTS entry: Chr 7 stSG609399
UniSTS entry: Chr 7 REN100763
UniSTS entry: Chr 7 REN100764
UniSTS entry: Chr 7 REN100762
UniSTS entry: Chr 7 Hoxa13
UniSTS entry: Chr 7 REN100765
UniSTS entry: Chr 7 ECD05314
UniSTS entry: Chr 7 RH66791
UniSTS entry: Chr 7 REN100771
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_000522.4 Homo sapiens homeobox A13 (HOXA13), mRNA PA
BC075791.1 Homo sapiens homeobox A13, mRNA (cDNA clone MGC:86983 IMAGE:30341785), complete cds PA
BC016712.1 Homo sapiens homeobox A13, mRNA (cDNA clone IMAGE:4108342), with apparent retained intron A

EST sequences (15)

BX119246.1 Clone IMAGp998H235759_;_IMAGE:2322118 prostate
CB129050.1 Clone L11SNU354-3-B11 liver 5' read
AI680621.1 Clone IMAGE:2322108 prostate 3' read A
AI680626.1 Clone IMAGE:2322118 prostate 3' read A
AI800530.1 Clone IMAGE:2063608 mixed 3' read A
CB959495.1 Clone IMAGE:30341785 placenta 5' read
BE784076.1 Clone IMAGE:3875344 eye 5' read
BF793608.1 Clone IMAGE:4346443 adrenal gland 5' read
BG289306.1 Clone IMAGE:4516421 bladder 5' read A
BG954125.1 intestine
AL597666.1 Clone DKFZp313C0815 uncharacterized tissue 5' read
BQ022936.1 Clone UI-1-BB1p-aue-d-05-0-UI placenta 3' read A
AA160421.1 Clone IMAGE:591699 pancreas 5' read
HY195509.1 Clone H04D040A04 testis
HY237471.1 Clone H04D177J15 testis


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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