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UGID:2061075     UniGene Hs.592064     Homo sapiens (human)   CLEC18A
C-type lectin domain family 18, member A (CLEC18A)

Human protein-coding gene CLEC18A. Represented by 49 ESTs from 29 cDNA libraries. EST representation biased toward embryoid body. Corresponds to 3 reference sequences (different isoforms). [UniGene 2061075 - Hs.592064]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_872425.2 CLEC18A gene product H. sapiens 100.0 445
NP_853527.2 C-type lectin domain family 18 member A precursor M. musculus 84.3 451
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
NP_001181323.1 C-type lectin domain family 18 member C precursor M. mulatta 97.8 445
XP_003918626.1 PREDICTED: C-type lectin domain family 18 member B-like isoform 1 P. anubis 97.8 445

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: embryoid body [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; mixed; testis; brain; embryonic tissue; uncharacterized tissue; eye; connective tissue; heart; bone; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q22.1
UniSTS entry: Chr 16 RH102328
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AF521893.1 Homo sapiens unnamed secretory protein mRNA, complete cds PA
AF428259.1 Homo sapiens hypothetical protein mRNA, complete cds PA
NM_182619.3 Homo sapiens C-type lectin domain family 18, member A (CLEC18A), transcript variant 1, mRNA P
BC078143.1 Homo sapiens C-type lectin domain family 18, member A, mRNA (cDNA clone MGC:87728 IMAGE:5761001), complete cds PA
BC141808.1 Homo sapiens C-type lectin domain family 18, member A, mRNA (cDNA clone MGC:164804 IMAGE:40147524), complete cds PA
AK289884.1 Homo sapiens cDNA FLJ77955 complete cds, highly similar to Homo sapiens secretory protein, mRNA P
AK298310.1 Homo sapiens cDNA FLJ56996 complete cds, highly similar to Homo sapiens secretory protein, mRNA P
AK074773.1 Homo sapiens cDNA FLJ90292 fis, clone NT2RP1001563, highly similar to Secretory protein LOC348174 P
NM_001136214.2 Homo sapiens C-type lectin domain family 18, member A (CLEC18A), transcript variant 2, mRNA P
NM_001271197.1 Homo sapiens C-type lectin domain family 18, member A (CLEC18A), transcript variant 3, mRNA P

EST sequences (10 of 49) [Show all sequences]

AI150446.1 Clone IMAGE:1752556 testis 3' read A
AL040183.1 Clone DKFZp434F2413 testis 5' read P
BX282706.1 Clone IMAGp998C0611455_;_IMAGE:5182397 mixed P
AI827695.1 Clone IMAGE:2350268 mixed 3' read A
AI863534.1 Clone IMAGE:2386307 kidney 3' read A
CD673170.1 Clone fg21f07 eye 5' read P
CD673796.1 Clone fs04f05 eye 5' read P
AW137750.1 Clone IMAGE:2716868 mixed 3' read A
AW451907.1 Clone IMAGE:3068581 uncharacterized tissue 3' read A
CN346808.1 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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