NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:2060369     UniGene Hs.591358     Homo sapiens (human)   CSTF2T
Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant (CSTF2T)

Human protein-coding gene CSTF2T. Represented by 255 ESTs from 146 cDNA libraries. Corresponds to reference sequence NM_015235.2. [UniGene 2060369 - Hs.591358]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056050.1 CSTF2T gene product H. sapiens 100.0 615
NP_112539.2 Cstf2t gene product M. musculus 92.2 631
XP_003199996.1 PREDICTED: cleavage stimulation factor subunit 2-like D. rerio 79.0 429
NP_001080179.1 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa X. laevis 74.7 517
NP_477453.1 cleavage stimulation factor 64 kilodalton subunit D. melanogaster 63.0 341
NP_499734.1 Protein CPF-2 C. elegans 54.9 275
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_001163035.2 PREDICTED: cleavage stimulation factor subunit 2 tau variant isoform 4 P. troglodytes 99.2 614
XP_001099871.1 PREDICTED: cleavage stimulation factor subunit 2 tau variant-like isoform 4 M. mulatta 98.7 619

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; embryonic tissue; vascular; mammary gland; ovary; connective tissue; intestine; heart; kidney; uncharacterized tissue; thymus; mixed; lung; placenta; eye; prostate; esophagus; pancreas; stomach; adrenal gland; mouth; spleen; testis; liver; skin; blood; cervix; bladder; trachea; bone; parathyroid; pharynx; lymph node; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q11
UniSTS entry: Chr 10 WI-15606 [Map Viewer]
UniSTS entry: Chr 10 D10S248E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AB014589.1 Homo sapiens mRNA for KIAA0689 protein, partial cds P
AK222574.1 Homo sapiens mRNA for cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant variant, clone: CAS01328 PA
AL136747.1 Homo sapiens mRNA; cDNA DKFZp434C1013 (from clone DKFZp434C1013) PA
NM_015235.2 Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant (CSTF2T), mRNA PA
BC017185.2 Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant, mRNA (cDNA clone IMAGE:3050380), with apparent retained intron PA
AK314318.1 Homo sapiens cDNA, FLJ95076, Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 2,64kDa, tau variant (CSTF2T), mRNA P
BC028239.1 Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant, mRNA (cDNA clone MGC:39866 IMAGE:5244025), complete cds PA
AY130299.1 Homo sapiens tCstF-64 (CSTF2T) mRNA, complete cds PA

EST sequences (10 of 255) [Show all sequences]

R17868.1 Clone IMAGE:31898 brain 5' read
AI096893.1 Clone IMAGE:1704338 brain 3' read A
BX102771.1 Clone IMAGp998F16167_;_IMAGE:38833 brain A
CB156090.1 Clone L18POOL1n1-1-E02 liver 5' read
AI271354.1 Clone IMAGE:1855405 mixed 3' read A
CB151320.1 Clone C1SNU17-28-D02 cervix 5' read P
AI280778.1 Clone IMAGE:1990736 uterus 3' read A
AI310133.1 Clone IMAGE:1914843 kidney 3' read A
AI336749.1 Clone IMAGE:1998614 stomach 3' read A
AI341716.1 Clone IMAGE:1939200 embryonic tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help