NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:1782863     UniGene Hs.567374     Homo sapiens (human)   EIF3C
Eukaryotic translation initiation factor 3, subunit C (EIF3C)

Human protein-coding gene EIF3C. Represented by 2685 ESTs from 422 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 1782863 - Hs.567374]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002808338.1 PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit C-like M. mulatta 100.0 912
XP_003916782.1 PREDICTED: eukaryotic translation initiation factor 3 subunit C-like isoform 1 P. anubis 100.0 912
NP_001186071.1 EIF3C gene product H. sapiens 100.0 912
XP_510902.2 PREDICTED: eukaryotic translation initiation factor 3 subunit C, partial P. troglodytes 99.7 565
XP_003434869.1 PREDICTED: eukaryotic translation initiation factor 3 subunit C isoform 1 C. lupus familiaris 99.6 912
NP_001029790.1 EIF3CL gene product B. taurus 99.6 911
NP_666312.1 eukaryotic translation initiation factor 3 subunit C M. musculus 98.9 910
NP_001129648.1 eukaryotic translation initiation factor 3 subunit C X. laevis 87.4 925
NP_998628.1 eif3c gene product D. rerio 86.7 916
NP_611242.1 eIF3-S8 D. melanogaster 60.9 873
NP_492638.1 Protein EIF-3.C C. elegans 53.0 642
XP_962952.1 eukaryotic translation initiation factor 3 N. crassa 52.0 369
NP_191174.1 translation initiation factor eIF-3 subunit 8 A. thaliana 50.9 334
XP_001703102.1 eukaryotic initiation factor C. reinhardtii 47.8 333
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
XP_002711923.1 PREDICTED: eukaryotic translation initiation factor 3, subunit C-like O. cuniculus 99.5 912
XP_004020914.1 PREDICTED: eukaryotic translation initiation factor 3 subunit C-like O. aries 99.5 911

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; skin; thymus; lung; embryonic tissue; intestine; uncharacterized tissue; placenta; eye; kidney; mouth; pancreas; uterus; lymph; connective tissue; liver; muscle; blood; prostate; mammary gland; spleen; ovary; trachea; stomach; vascular; ascites; umbilical cord; thyroid; cervix; heart; bone; mixed; bone marrow; ganglia; adrenal gland; nerve; bladder; salivary gland; esophagus; lymph node; tonsil; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: Chr 16 D16S2553E
UniSTS entry: Chr 16 SGC31754 [Map Viewer]
UniSTS entry: RH68423
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (22)

BT007335.1 Homo sapiens eukaryotic translation initiation factor 3, subunit 8, 110kDa mRNA, complete cds P
AK130531.1 Homo sapiens cDNA FLJ27021 fis, clone SLV06146, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
NM_003752.3 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 1, mRNA PA
AK000739.1 Homo sapiens cDNA FLJ20732 fis, clone HEP08682 P
BC071705.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone MGC:87986 IMAGE:5552014), complete cds PA
BC107692.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone IMAGE:4296645), partial cds PA
NM_001037808.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 2, mRNA PA
BC000533.2 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone IMAGE:2964655), complete cds PA
AY762099.1 Homo sapiens cell migration-inducing protein 17 mRNA, complete cds PA
AK055366.1 Homo sapiens cDNA FLJ30804 fis, clone FEBRA2001267, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
BC001571.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone MGC:5500 IMAGE:3452953), complete cds PA
AK292155.1 Homo sapiens cDNA FLJ78287 complete cds, highly similar to Homo sapiens eukaryotic translation initiation factor 3, subunit 8,110kDa (EIF3S8), mRNA P
BC157849.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone MGC:189744 IMAGE:9057068), complete cds P
BC157842.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C-like, mRNA (cDNA clone MGC:189737 IMAGE:9057061), complete cds P
AK301233.1 Homo sapiens cDNA FLJ53378 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK301183.1 Homo sapiens cDNA FLJ55450 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK293264.1 Homo sapiens cDNA FLJ54488 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK299421.1 Homo sapiens cDNA FLJ55750 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK304500.1 Homo sapiens cDNA FLJ54404 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK303790.1 Homo sapiens cDNA FLJ54400 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
NM_001199142.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 3, mRNA P
NM_001267574.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 4, mRNA PA

EST sequences (10 of 2685) [Show all sequences]

T06050.1 Clone HFBDN46 brain P
AA906731.1 Clone IMAGE:1520130 uncharacterized tissue 3' read P
AI125466.1 Clone IMAGE:1737058 testis 3' read PA
AI125475.1 Clone IMAGE:1737059 testis 3' read PA
AI125666.1 Clone IMAGE:1736771 testis 3' read P
CB112911.1 Clone L6ChoCK0-10-A03 liver 5' read P
CB152114.1 Clone B1T694954-18-E09 brain 5' read P
CB153611.1 Clone B1T694954-33-F09 brain 5' read P
CB155232.1 Clone B2N807043-13-H08 brain 5' read P
CB130828.1 Clone L13SNU387-12-H04 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help