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UGID:138237     UniGene Hs.55276     Homo sapiens (human)   KCND1
Potassium voltage-gated channel, Shal-related subfamily, member 1 (KCND1)

Human protein-coding gene KCND1. Represented by 31 ESTs from 19 cDNA libraries. Corresponds to reference sequence NM_004979.4. [UniGene 138237 - Hs.55276]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004970.3 KCND1 gene product H. sapiens 100.0 646
XP_521053.3 PREDICTED: potassium voltage-gated channel subfamily D member 1 P. troglodytes 100.0 580
XP_001104621.1 PREDICTED: potassium voltage-gated channel subfamily D member 1-like M. mulatta 99.5 646
XP_003917737.1 PREDICTED: potassium voltage-gated channel subfamily D member 1 P. anubis 99.5 646
NP_032449.1 potassium voltage-gated channel subfamily D member 1 precursor M. musculus 97.2 650
NP_001119942.1 potassium voltage-gated channel subfamily D member 1 D. rerio 84.8 631
NP_524159.1 shaker cognate l, isoform A D. melanogaster 80.5 488
NP_001079287.1 potassium voltage-gated channel, Shal-related subfamily, member 3 precursor X. laevis 73.4 642
NP_500975.2 Protein SHL-1 C. elegans 70.8 513
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_855372.1 PREDICTED: potassium voltage-gated channel subfamily D member 1 C. lupus familiaris 98.8 646
XP_001494925.1 PREDICTED: potassium voltage-gated channel subfamily D member 1 E. caballus 98.5 646

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; placenta; intestine; testis; prostate; connective tissue; heart; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.23
UniSTS entry: Chr X RH93281
UniSTS entry: Chr X KCND1_v412
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AJ005898.1 Homo sapiens mRNA for shal-type potassium channel KCND1 (Kv4.1), complete CDS (clone IMAGE 37769, IMAGE 327112 and LLNLc110P1332Q7 (RZPD Berlin)) P
BC045659.1 Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 1, mRNA (cDNA clone MGC:43677 IMAGE:5271042), complete cds PA
NM_004979.4 Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 1 (KCND1), mRNA P
AF166003.1 Homo sapiens voltage-gated potassium channel Kv4.1 (KCND1) mRNA, complete cds P
AB021865.1 Homo sapiens KCND1 mRNA for shal-type potassium channel (Kv4.1), complete cds P
AK315092.1 Homo sapiens cDNA, FLJ96049, Homo sapiens potassium voltage-gated channel, Shal-relatedsubfamily, member 1 (KCND1), mRNA P

EST sequences (10 of 31) [Show all sequences]

R16330.1 Clone IMAGE:30329 brain 5' read
R19492.1 Clone IMAGE:32952 brain 5' read P
AI150825.1 Clone IMAGE:1704874 heart 3' read A
AI694424.1 Clone IMAGE:2338220 lung 3' read A
R61454.1 Clone IMAGE:37769 brain 5' read P
BX280616.1 Clone IMAGp998J22148_;_IMAGE:30329 brain
F05846.1 Clone c-0od02 brain
AL120075.1 Clone DKFZp761M132 brain 5' read P
F07466.1 Clone c-26g06 brain
Z40519.1 Clone c-26g06 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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