NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:1371530     UniGene Hs.535216     Homo sapiens (human)   FAM47C
Family with sequence similarity 47, member C (FAM47C)

Human protein-coding gene FAM47C. Represented by 28 ESTs from 7 cDNA libraries. EST representation biased toward testis. Corresponds to reference sequence NM_001013736.2. [UniGene 1371530 - Hs.535216]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001013758.1 putative protein FAM47C H. sapiens 100.0 1034
Other hits (2 of 6) [Show all]SpeciesId(%)Len(aa)
XP_003917609.1 PREDICTED: putative protein FAM47C P. anubis 80.6 1035
XP_002806227.1 PREDICTED: putative protein FAM47C-like isoform 3 M. mulatta 78.7 662

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; uncharacterized tissue; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp21.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

AK125992.1 Homo sapiens cDNA FLJ44004 fis, clone TESTI4023546, weakly similar to Sialidase (EC 3.2.1.18) P
NM_001013736.2 Homo sapiens family with sequence similarity 47, member C (FAM47C), mRNA P

EST sequences (10 of 28) [Show all sequences]

AI125523.1 Clone IMAGE:1737098 testis 3' read P
AI867768.1 Clone IMAGE:2307940 uncharacterized tissue 3' read
AW016180.1 Clone IMAGE:2712216 uncharacterized tissue 3' read A
AW172301.1 Clone IMAGE:2659372 mixed 3' read P
CR737704.1 Clone IMAGp998A034414_;_IMAGE:1737098 testis 5' read P
T19457.1 Clone g08050 testis 5' read P
DB081273.1 Clone TESTI4027187 testis 5' read P
DB082026.1 Clone TESTI4028265 testis 5' read P
DB076910.1 Clone TESTI4021318 testis 5' read P
DB090516.1 Clone TESTI4039494 testis 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help