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UGID:1370781     UniGene Hs.534467     Homo sapiens (human)   C19orf80
Chromosome 19 open reading frame 80 (C19orf80)

Human protein-coding gene C19orf80. Represented by 18 ESTs from 11 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_018687.6. [UniGene 1370781 - Hs.534467]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_061157.3 C19orf80 gene product H. sapiens 100.0 197
NP_001074409.1 Gm6484 gene product M. musculus 73.7 197
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_003316163.1 PREDICTED: LOW QUALITY PROTEIN: hepatocellular carcinoma-associated protein TD26 P. troglodytes 99.0 197
XP_003914964.1 PREDICTED: hepatocellular carcinoma-associated protein TD26 P. anubis 92.1 253

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; kidney; heart; lung; uncharacterized tissue; mammary gland; mixed; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AY358356.1 Homo sapiens clone DNA62881 PVPA599 (UNQ599) mRNA, complete cds PA
NM_018687.6 Homo sapiens chromosome 19 open reading frame 80 (C19orf80), mRNA PA
AF271350.2 Homo sapiens hepatocellular carcinoma associated protein TD26 mRNA, complete cds PA
BC113823.1 Homo sapiens hepatocellular carcinoma-associated gene TD26, mRNA (cDNA clone IMAGE:40023368), partial cds P

EST sequences (10 of 18) [Show all sequences]

AA923549.1 Clone IMAGE:1536205 kidney 3' read A
AI950351.1 Clone IMAGE:2464400 kidney 3' read A
BP316755.1 Clone PCD02203 heart 5' read P
AV654765.1 Clone GLCDZC07 liver 3' read P
AV655891.2 Clone GLCELF03 liver 3' read P
AV656119.2 Clone GLCEOA05 liver 3' read P
AV656411.1 Clone GLCERA10 liver 3' read P
AV690404.1 Clone GKCEGH08 liver 5' read P
AV697855.1 Clone GKCEUE08 liver 5' read A
BF846453.1 lung


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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