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UGID:1370697     UniGene Hs.534383     Homo sapiens (human)   COX17
Cytochrome c oxidase assembly homolog 17 (yeast) (COX17)

Human protein-coding gene COX17. Represented by 305 ESTs from 131 cDNA libraries. Corresponds to reference sequence NM_005694.1. [UniGene 1370697 - Hs.534383]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_516668.2 PREDICTED: popeye domain-containing protein 2 P. troglodytes 99.0 202
NP_071418.2 POPDC2 gene product H. sapiens 99.0 202
XP_001110132.1 PREDICTED: popeye domain-containing protein 2-like isoform 2 M. mulatta 98.5 202
XP_003894024.1 PREDICTED: popeye domain-containing protein 2 P. anubis 98.5 202
NP_071713.1 popeye domain-containing protein 2 isoform 2 M. musculus 91.0 201
NP_001087966.1 popeye domain containing 2 X. laevis 73.7 209
NP_001018636.1 popdc2 gene product D. rerio 69.6 194
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_002716712.1 PREDICTED: popeye domain containing 2-like isoform 2 O. cuniculus 93.5 201
NP_954544.1 Popdc2 gene product R. norvegicus 92.5 201

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; brain; mammary gland; bone marrow; liver; placenta; lung; heart; uterus; ear; muscle; intestine; eye; embryonic tissue; kidney; pharynx; bladder; connective tissue; pancreas; testis; prostate; uncharacterized tissue; blood; ovary; pituitary gland; thyroid; skin; adrenal gland; mouth; stomach; ascites; vascular; bone; lymph node; parathyroid; trachea
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q13.33
UniSTS entry: Chr 13 RH67876 [Map Viewer]
UniSTS entry: Chr 13 STS-W67166 [Map Viewer]
UniSTS entry: Chr 3 SHGC-77235 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

NM_005694.1 Homo sapiens cytochrome c oxidase assembly homolog 17 (yeast) (COX17), nuclear gene encoding mitochondrial protein, mRNA
BC105280.1 Homo sapiens COX17 cytochrome c oxidase assembly homolog (S. cerevisiae), mRNA (cDNA clone MGC:104397 IMAGE:6739165), complete cds A
BC108317.1 Homo sapiens COX17 cytochrome c oxidase assembly homolog (S. cerevisiae), mRNA (cDNA clone MGC:117386 IMAGE:6059346), complete cds A
L77701.1 Homo sapiens COX17 mRNA, complete cds
BC010933.1 Homo sapiens COX17 cytochrome c oxidase assembly homolog (S. cerevisiae), mRNA (cDNA clone MGC:13542 IMAGE:4296970), complete cds A
AK312143.1 Homo sapiens cDNA, FLJ92426, Homo sapiens COX17 homolog, cytochrome c oxidase assembly protein(yeast) (COX17), nuclear gene encoding mitochondrial protein, mRNA
AK377184.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F12, expressed in breast tumor tissue
AK377182.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F10, expressed in ovary tumor tissue
AK377180.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F8, expressed in uterus normal tissue
AK377178.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F6, expressed in kidney normal tissue
AK377176.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F4, expressed in kidney tumor tissue
AK377183.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F11, expressed in breast tumor tissue
AK377181.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F9, expressed in breast tumor tissue
AK377179.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F7, expressed in colon tumor tissue
AK377177.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F5, expressed in bladder tumor tissue
AK377175.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F3, expressed in kidney tumor tissue
AK377173.1 Homo sapiens mRNA, clone: COX17-POPCD2-Hu-F1, expressed in lung tumor tissue

EST sequences (10 of 305) [Show all sequences]

AA974189.1 Clone IMAGE:1586263 uncharacterized tissue 3' read
AI090800.1 Clone IMAGE:1692218 heart 3' read
AI093009.1 Clone IMAGE:1692808 heart 3' read
AI085404.1 Clone IMAGE:1653268 mixed 3' read
AI123622.1 Clone IMAGE:1566306 mixed 3' read
AI151080.1 Clone IMAGE:1703318 brain 3' read
AI087171.1 Clone IMAGE:1679670 skin 3' read
BX094462.1 Clone IMAGp998I0897_;_IMAGE:115279 mixed A
BX108464.1 Clone IMAGp998A154326_;_IMAGE:1703318 brain
BX107024.1 Clone IMAGp998H135206_;_IMAGE:2110908 mixed


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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