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UGID:1292074     UniGene Hs.532699     Homo sapiens (human)   GCDH
Glutaryl-CoA dehydrogenase (GCDH)

Human protein-coding gene GCDH. Represented by 324 ESTs from 162 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1292074 - Hs.532699]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000150.1 GCDH gene product H. sapiens 100.0 437
XP_001170352.2 PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 9 P. troglodytes 99.5 437
NP_032123.3 Gcdh gene product M. musculus 91.7 446
NP_001086623.1 glutaryl-CoA dehydrogenase X. laevis 83.4 439
NP_957180.1 gcdh gene product D. rerio 82.1 440
NP_609040.1 CG9547 D. melanogaster 75.7 404
NP_496469.1 Protein F54D5.7 C. elegans 68.5 390
XP_959935.1 glutaryl-CoA dehydrogenase, mitochondrial precursor N. crassa 59.7 402
Other hits (2 of 41) [Show all]SpeciesId(%)Len(aa)
XP_003915048.1 PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial P. anubis 99.3 427
XP_001110430.1 PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial isoform 3 M. mulatta 99.1 437

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; kidney; bone; placenta; mixed; liver; intestine; testis; prostate; blood; connective tissue; tonsil; vascular; spleen; ovary; embryonic tissue; heart; skin; stomach; eye; thymus; lymph; uterus; mouth; cervix; ascites; bone marrow; mammary gland; lymph node; esophagus; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.2
UniSTS entry: Chr 19 GDB:568782
UniSTS entry: Chr 19 GDB:362952
UniSTS entry: GDB:568756
UniSTS entry: Chr 19 SHGC-24430 [Map Viewer]
UniSTS entry: Chr 19 RH44737
UniSTS entry: Chr 19 D19S1133
UniSTS entry: Chr 19 WI-17002 [Map Viewer]
UniSTS entry: Chr 19 RH17829
UniSTS entry: GDB:568776
UniSTS entry: GDB:568779
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BT006706.1 Homo sapiens glutaryl-Coenzyme A dehydrogenase mRNA, complete cds P
NM_000159.2 Homo sapiens glutaryl-CoA dehydrogenase (GCDH), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
NM_013976.2 Homo sapiens glutaryl-CoA dehydrogenase (GCDH), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
BC002579.2 Homo sapiens glutaryl-Coenzyme A dehydrogenase, mRNA (cDNA clone MGC:1743 IMAGE:3142978), complete cds PA
AK290407.1 Homo sapiens cDNA FLJ76015 complete cds, highly similar to Homo sapiens glutaryl-Coenzyme A dehydrogenase (GCDH), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA P
AK309892.1 Homo sapiens cDNA, FLJ99933 P
AK098370.1 Homo sapiens cDNA FLJ25504 fis, clone CBR04473, highly similar to GLUTARYL-COA DEHYDROGENASE PRECURSOR (EC 1.3.99.7) P
AK300841.1 Homo sapiens cDNA FLJ60352 complete cds, highly similar to Glutaryl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.7) P
AK298772.1 Homo sapiens cDNA FLJ59956 complete cds, highly similar to Glutaryl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.7) P
AK296446.1 Homo sapiens cDNA FLJ59559 complete cds, highly similar to Glutaryl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.7) PA
U69141.1 Human glutaryl-CoA dehydrogenase mRNA, complete cds PA

EST sequences (10 of 324) [Show all sequences]

AA975212.1 Clone IMAGE:1555433 kidney 3' read A
R16391.1 Clone IMAGE:29829 brain 5' read
AI049896.1 Clone IMAGE:1700203 kidney 3' read A
AI097477.1 Clone IMAGE:1707353 heart 3' read A
BX090910.1 Clone IMAGp998D01176_;_IMAGE:42544 brain P
AI268716.1 Clone IMAGE:1910953 lung 3' read A
AI269241.1 Clone IMAGE:1865173 kidney 3' read P
CB112338.1 Clone L6ChoCK0-5-B07 liver 5' read
CB114901.1 Clone L7N800102-3-E03 liver 5' read
AI199694.1 Clone IMAGE:1860872 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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