NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:1205169     UniGene Hs.530902     Homo sapiens (human)   IGSF6
Immunoglobulin superfamily, member 6 (IGSF6)

Human protein-coding gene IGSF6. Represented by 49 ESTs from 37 cDNA libraries. Corresponds to reference sequence NM_005849.3. [UniGene 1205169 - Hs.530902]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005840.2 IGSF6 gene product H. sapiens 100.0 240
XP_001160217.1 PREDICTED: immunoglobulin superfamily member 6 isoform 2 P. troglodytes 99.6 240
NP_109616.1 immunoglobulin superfamily member 6 precursor M. musculus 66.5 233
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_001093144.1 PREDICTED: immunoglobulin superfamily member 6 M. mulatta 94.2 240
XP_003916711.1 PREDICTED: immunoglobulin superfamily member 6 P. anubis 93.8 239

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; uncharacterized tissue; mixed; embryonic tissue; pharynx; brain; kidney; connective tissue; uterus; adrenal gland; blood; placenta; vascular; bone marrow; esophagus; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.2
UniSTS entry: Chr 16 RH65112
UniSTS entry: Chr 1 D11S3316
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AJ223183.1 Homo sapiens mRNA for DORA protein P
NM_005849.3 Homo sapiens immunoglobulin superfamily, member 6 (IGSF6), mRNA P
AK223286.1 Homo sapiens mRNA for immunoglobulin superfamily, member 6 variant, clone: SYN03106 P
BC017844.1 Homo sapiens immunoglobulin superfamily, member 6, mRNA (cDNA clone MGC:22530 IMAGE:4616809), complete cds PA
AK290910.1 Homo sapiens cDNA FLJ78097 complete cds, highly similar to Homo sapiens immunoglobulin superfamily, member 6 (IGSF6), mRNA P
AK313860.1 Homo sapiens cDNA, FLJ94492, highly similar to Homo sapiens immunoglobulin superfamily, member 6 (IGSF6), mRNA P
AK293703.1 Homo sapiens cDNA FLJ57907 complete cds, highly similar to Homo sapiens immunoglobulin superfamily, member 6 (IGSF6), mRNA PA

EST sequences (10 of 49) [Show all sequences]

AA976163.1 Clone IMAGE:1556213 uncharacterized tissue 3' read
AI082048.1 Clone IMAGE:1678627 mixed 3' read
BX114644.1 Clone IMAGp998A186102_;_IMAGE:2453657 uterus A
AI214456.1 Clone IMAGE:1840398 mixed 3' read A
AI761850.1 Clone IMAGE:2370129 mixed 3' read P
CB528686.1 Clone UI-H-FT2-bjd-j-24-0-UI lung 3' read A
CB957059.1 Clone IMAGE:30350084 mixed 5' read P
AI814576.1 Clone IMAGE:2408599 lung 3' read
BX398614.2 Clone CS0DI061YO12 placenta 5' read P
CD367133.1 Clone UI-H-FT2-bjp-n-22-0-UI lung 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help